Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC170Q8IYT3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
CCDC170Q8IYT3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC170Q8IYT3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC170Q8IYT3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC170Q8IYT3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 AC007322.1-201ENST00000426983 750 ntBASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 KRT18P5-201ENST00000436075 1291 ntBASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC170Q8IYT3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC170Q8IYT3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC170Q8IYT3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC170Q8IYT3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC170Q8IYT3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC170Q8IYT3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC170Q8IYT3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC170Q8IYT3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC170Q8IYT3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC170Q8IYT3 AC087623.3-201ENST00000607047 1098 ntBASIC20.89■□□□□ 0.93
CCDC170Q8IYT3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC170Q8IYT3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC170Q8IYT3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC170Q8IYT3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC170Q8IYT3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 GPX1P1-201ENST00000388829 606 ntBASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC170Q8IYT3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC170Q8IYT3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC170Q8IYT3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC170Q8IYT3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CCDC170Q8IYT3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC170Q8IYT3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms