Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 AC005332.7-201ENST00000614046 2005 ntBASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC65Q8IXS2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 MIR4651-201ENST00000582622 73 ntBASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 AC006058.3-201ENST00000606217 1069 ntBASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC65Q8IXS2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC65Q8IXS2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 POU5F1P3-201ENST00000428824 1078 ntBASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 AL023875.1-201ENST00000640777 796 ntBASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 AC073648.6-201ENST00000641589 218 ntBASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CCDC65Q8IXS2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 ZNF815P-204ENST00000434898 1737 ntBASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CCDC65Q8IXS2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC65Q8IXS2 AC239809.2-201ENST00000415381 517 ntBASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms