Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 KRT8P20-201ENST00000423953 1409 ntBASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.62■□□□□ 0.41
RP1L1Q8IWN7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 AL512604.3-201ENST00000569583 964 ntBASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RP1L1Q8IWN7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 PCED1CP-201ENST00000419887 785 ntBASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 KRT8P17-201ENST00000453110 1448 ntBASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 AC010203.1-204ENST00000548782 407 ntBASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 LINC00565-201ENST00000562710 2331 ntBASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 AC140113.3-201ENST00000605663 199 ntBASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 AC008622.2-201ENST00000617006 1229 ntBASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 AL691432.3-201ENST00000621860 400 ntBASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RP1L1Q8IWN7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 SMG8-203ENST00000578922 2178 ntBASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 AC092338.2-201ENST00000568827 1415 ntBASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 GPALPP1-207ENST00000611650 899 ntBASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 TSPY17P-201ENST00000450329 467 ntBASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RP1L1Q8IWN7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RP1L1Q8IWN7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RP1L1Q8IWN7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RP1L1Q8IWN7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RP1L1Q8IWN7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RP1L1Q8IWN7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RP1L1Q8IWN7 HLA-G-202ENST00000376815 851 ntBASIC17.58■□□□□ 0.41
RP1L1Q8IWN7 HLA-G-203ENST00000376818 1127 ntBASIC17.58■□□□□ 0.41
RP1L1Q8IWN7 AC091390.4-202ENST00000476426 537 ntBASIC17.58■□□□□ 0.41
RP1L1Q8IWN7 Z85996.1-201ENST00000494644 937 ntBASIC17.58■□□□□ 0.41
RP1L1Q8IWN7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.58■□□□□ 0.41
RP1L1Q8IWN7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms