Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MIR4767-201ENST00000582827 78 ntBASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 PCDHA12-202ENST00000613593 2588 ntBASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.08■□□□□ 0.33
LYSMD2Q8IV50 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.08■□□□□ 0.32
LYSMD2Q8IV50 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 AL139384.1-201ENST00000612143 3047 ntBASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LYSMD2Q8IV50 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 SIRPAP1-201ENST00000448467 1770 ntBASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 AC008764.6-201ENST00000595909 2069 ntBASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LYSMD2Q8IV50 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LYSMD2Q8IV50 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms