Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.91■□□□□ 0.94
NPAS4Q8IUM7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.91■□□□□ 0.94
NPAS4Q8IUM7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS4Q8IUM7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPAS4Q8IUM7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.91■□□□□ 0.94
NPAS4Q8IUM7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NPAS4Q8IUM7 AL121956.5-201ENST00000625261 221 ntBASIC20.91■□□□□ 0.94
NPAS4Q8IUM7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.91■□□□□ 0.94
NPAS4Q8IUM7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
NPAS4Q8IUM7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 AC140113.3-201ENST00000605663 199 ntBASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NPAS4Q8IUM7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.89■□□□□ 0.94
NPAS4Q8IUM7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPAS4Q8IUM7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 AP003041.3-201ENST00000527151 707 ntBASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPAS4Q8IUM7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 AL023973.1-201ENST00000624619 620 ntBASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAS4Q8IUM7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 FAM86EP-206ENST00000510506 987 ntBASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 AL441883.1-201ENST00000566170 1045 ntBASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.87■□□□□ 0.93
NPAS4Q8IUM7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 PCED1CP-201ENST00000419887 785 ntBASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 AC009947.2-201ENST00000444014 672 ntBASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.86■□□□□ 0.93
NPAS4Q8IUM7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms