Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AP000593.1-201ENST00000393668 712 ntBASIC23.05■■□□□ 1.28
USP50Q70EL3 AL022342.1-201ENST00000400363 863 ntBASIC23.05■■□□□ 1.28
USP50Q70EL3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP50Q70EL3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.05■■□□□ 1.28
USP50Q70EL3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
USP50Q70EL3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP50Q70EL3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP50Q70EL3 BX119927.1-201ENST00000636596 1552 ntBASIC23.05■■□□□ 1.28
USP50Q70EL3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP50Q70EL3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP50Q70EL3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP50Q70EL3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.04■■□□□ 1.28
USP50Q70EL3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.04■■□□□ 1.28
USP50Q70EL3 LINC01465-201ENST00000408887 1940 ntBASIC23.04■■□□□ 1.28
USP50Q70EL3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP50Q70EL3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.04■■□□□ 1.28
USP50Q70EL3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP50Q70EL3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP50Q70EL3 AP002383.4-201ENST00000442518 975 ntBASIC23.04■■□□□ 1.28
USP50Q70EL3 RASA4DP-201ENST00000460726 1199 ntBASIC23.04■■□□□ 1.28
USP50Q70EL3 AC092597.1-201ENST00000487352 616 ntBASIC23.04■■□□□ 1.28
USP50Q70EL3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP50Q70EL3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.04■■□□□ 1.28
USP50Q70EL3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.04■■□□□ 1.28
USP50Q70EL3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.04■■□□□ 1.28
USP50Q70EL3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP50Q70EL3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP50Q70EL3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP50Q70EL3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP50Q70EL3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP50Q70EL3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP50Q70EL3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP50Q70EL3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP50Q70EL3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.03■■□□□ 1.28
USP50Q70EL3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
USP50Q70EL3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP50Q70EL3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.03■■□□□ 1.28
USP50Q70EL3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP50Q70EL3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.03■■□□□ 1.28
USP50Q70EL3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.03■■□□□ 1.28
USP50Q70EL3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
USP50Q70EL3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP50Q70EL3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.03■■□□□ 1.28
USP50Q70EL3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.03■■□□□ 1.28
USP50Q70EL3 AC034232.1-201ENST00000506026 1064 ntBASIC23.03■■□□□ 1.28
USP50Q70EL3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.03■■□□□ 1.28
USP50Q70EL3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.03■■□□□ 1.28
USP50Q70EL3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC23.03■■□□□ 1.28
USP50Q70EL3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.03■■□□□ 1.28
USP50Q70EL3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.03■■□□□ 1.28
USP50Q70EL3 IFNL4P1-201ENST00000607083 540 ntBASIC23.03■■□□□ 1.28
USP50Q70EL3 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.03■■□□□ 1.28
USP50Q70EL3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP50Q70EL3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP50Q70EL3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.03■■□□□ 1.28
USP50Q70EL3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP50Q70EL3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.03■■□□□ 1.28
USP50Q70EL3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.03■■□□□ 1.28
USP50Q70EL3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.03■■□□□ 1.28
USP50Q70EL3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
USP50Q70EL3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP50Q70EL3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.02■■□□□ 1.28
USP50Q70EL3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
USP50Q70EL3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP50Q70EL3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP50Q70EL3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.02■■□□□ 1.28
USP50Q70EL3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP50Q70EL3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
USP50Q70EL3 AC104692.2-201ENST00000603054 253 ntBASIC23.02■■□□□ 1.28
USP50Q70EL3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.02■■□□□ 1.28
USP50Q70EL3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.02■■□□□ 1.28
USP50Q70EL3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP50Q70EL3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP50Q70EL3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP50Q70EL3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
USP50Q70EL3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.01■■□□□ 1.27
USP50Q70EL3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.01■■□□□ 1.27
USP50Q70EL3 EMBP1-201ENST00000458200 901 ntBASIC23.01■■□□□ 1.27
USP50Q70EL3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP50Q70EL3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.01■■□□□ 1.27
USP50Q70EL3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
USP50Q70EL3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP50Q70EL3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
USP50Q70EL3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP50Q70EL3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP50Q70EL3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.01■■□□□ 1.27
USP50Q70EL3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP50Q70EL3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.01■■□□□ 1.27
USP50Q70EL3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.01■■□□□ 1.27
USP50Q70EL3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP50Q70EL3 AC092720.2-201ENST00000602388 1665 ntBASIC23■■□□□ 1.27
USP50Q70EL3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
USP50Q70EL3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23■■□□□ 1.27
USP50Q70EL3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP50Q70EL3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP50Q70EL3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP50Q70EL3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23■■□□□ 1.27
USP50Q70EL3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23■■□□□ 1.27
USP50Q70EL3 AL160237.2-201ENST00000556165 472 ntBASIC23■■□□□ 1.27
USP50Q70EL3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms