Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CTR9Q6PD62 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CTR9Q6PD62 AC079598.2-202ENST00000546624 1451 ntBASIC23.14■■□□□ 1.29
CTR9Q6PD62 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTR9Q6PD62 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.14■■□□□ 1.29
CTR9Q6PD62 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.14■■□□□ 1.29
CTR9Q6PD62 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.14■■□□□ 1.29
CTR9Q6PD62 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.14■■□□□ 1.29
CTR9Q6PD62 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.14■■□□□ 1.29
CTR9Q6PD62 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.14■■□□□ 1.29
CTR9Q6PD62 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.14■■□□□ 1.29
CTR9Q6PD62 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTR9Q6PD62 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTR9Q6PD62 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTR9Q6PD62 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.13■■□□□ 1.29
CTR9Q6PD62 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTR9Q6PD62 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTR9Q6PD62 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTR9Q6PD62 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.13■■□□□ 1.29
CTR9Q6PD62 AC011506.1-201ENST00000474329 610 ntBASIC23.13■■□□□ 1.29
CTR9Q6PD62 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.13■■□□□ 1.29
CTR9Q6PD62 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTR9Q6PD62 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CTR9Q6PD62 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.13■■□□□ 1.29
CTR9Q6PD62 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTR9Q6PD62 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTR9Q6PD62 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTR9Q6PD62 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTR9Q6PD62 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CTR9Q6PD62 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CTR9Q6PD62 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTR9Q6PD62 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTR9Q6PD62 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTR9Q6PD62 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CTR9Q6PD62 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CTR9Q6PD62 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTR9Q6PD62 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 AC131212.4-201ENST00000623606 975 ntBASIC23.12■■□□□ 1.29
CTR9Q6PD62 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTR9Q6PD62 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTR9Q6PD62 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.12■■□□□ 1.29
CTR9Q6PD62 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.11■■□□□ 1.29
CTR9Q6PD62 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.11■■□□□ 1.29
CTR9Q6PD62 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CTR9Q6PD62 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTR9Q6PD62 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CTR9Q6PD62 AC211429.1-201ENST00000415277 523 ntBASIC23.11■■□□□ 1.29
CTR9Q6PD62 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTR9Q6PD62 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTR9Q6PD62 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.11■■□□□ 1.29
CTR9Q6PD62 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CTR9Q6PD62 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.11■■□□□ 1.29
CTR9Q6PD62 AC026271.3-201ENST00000571884 352 ntBASIC23.11■■□□□ 1.29
CTR9Q6PD62 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTR9Q6PD62 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CTR9Q6PD62 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTR9Q6PD62 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTR9Q6PD62 LINC01465-201ENST00000408887 1940 ntBASIC23.11■■□□□ 1.29
CTR9Q6PD62 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CTR9Q6PD62 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.11■■□□□ 1.29
CTR9Q6PD62 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.11■■□□□ 1.29
CTR9Q6PD62 AC073130.3-201ENST00000624389 2278 ntBASIC23.11■■□□□ 1.29
CTR9Q6PD62 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.1■■□□□ 1.29
CTR9Q6PD62 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CTR9Q6PD62 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
CTR9Q6PD62 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CTR9Q6PD62 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CTR9Q6PD62 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CTR9Q6PD62 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.1■■□□□ 1.29
CTR9Q6PD62 AC087499.1-201ENST00000418141 1075 ntBASIC23.1■■□□□ 1.29
CTR9Q6PD62 B3GAT3P1-201ENST00000471720 806 ntBASIC23.1■■□□□ 1.29
CTR9Q6PD62 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.1■■□□□ 1.29
CTR9Q6PD62 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CTR9Q6PD62 AP000525.1-201ENST00000608286 694 ntBASIC23.1■■□□□ 1.29
CTR9Q6PD62 MIR6786-201ENST00000616843 113 ntBASIC23.1■■□□□ 1.29
CTR9Q6PD62 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.1■■□□□ 1.29
CTR9Q6PD62 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.1■■□□□ 1.29
CTR9Q6PD62 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CTR9Q6PD62 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CTR9Q6PD62 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CTR9Q6PD62 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CTR9Q6PD62 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CTR9Q6PD62 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.1■■□□□ 1.29
CTR9Q6PD62 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CTR9Q6PD62 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CTR9Q6PD62 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.09■■□□□ 1.29
CTR9Q6PD62 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CTR9Q6PD62 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms