Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 MRPL3P1-201ENST00000400109 1033 ntBASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 NEK4P2-201ENST00000580004 1012 ntBASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.91■□□□□ 0.62
RSPO4Q2I0M5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 AF228730.7-201ENST00000641842 219 ntBASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RSPO4Q2I0M5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RSPO4Q2I0M5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RSPO4Q2I0M5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 MIR574-201ENST00000385209 96 ntBASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 HMGN1P19-201ENST00000436976 333 ntBASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RSPO4Q2I0M5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RSPO4Q2I0M5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 HLA-A-201ENST00000376802 1334 ntBASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RSPO4Q2I0M5 TFP1-202ENST00000475455 1573 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms