Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 RABEPK-203ENST00000373544 2450 ntTSL 1 (best) BASIC9.75□□□□□ -0.852e-7■■□□□ 12.9
SRSF1Q07955 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.922e-7■■□□□ 12.9
SRSF1Q07955 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.362e-7■■□□□ 12.9
SRSF1Q07955 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC4.96□□□□□ -1.622e-7■■□□□ 12.9
SRSF1Q07955 GTF3C3-207ENST00000451088 488 ntTSL 34.85□□□□□ -1.632e-7■■□□□ 12.9
SRSF1Q07955 GTF3C3-208ENST00000455546 547 ntTSL 44.57□□□□□ -1.682e-7■■□□□ 12.9
SRSF1Q07955 SIPA1L1-206ENST00000554362 552 ntTSL 53.19□□□□□ -1.92e-7■■□□□ 12.9
SRSF1Q07955 SIPA1L1-205ENST00000554126 576 ntTSL 52.06□□□□□ -2.082e-7■■□□□ 12.9
SRSF1Q07955 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.291e-7■■□□□ 12.9
SRSF1Q07955 NEAT1_3.1-201ENST00000613347 159 ntBASIC10.4□□□□□ -0.742e-40■■□□□ 12.9
SRSF1Q07955 CDK5RAP3-213ENST00000579605 560 ntTSL 414.04□□□□□ -0.164e-7■■□□□ 12.9
SRSF1Q07955 CDK5RAP3-222ENST00000581708 543 ntTSL 411.83□□□□□ -0.524e-7■■□□□ 12.9
SRSF1Q07955 CDK5RAP3-214ENST00000579632 738 ntTSL 49.09□□□□□ -0.954e-7■■□□□ 12.9
SRSF1Q07955 SAFB-209ENST00000591666 632 ntTSL 318.31■□□□□ 0.521e-6■■□□□ 12.9
SRSF1Q07955 SAFB-204ENST00000586934 995 ntTSL 517.73■□□□□ 0.431e-6■■□□□ 12.9
SRSF1Q07955 SAFB-208ENST00000590485 548 ntTSL 34.68□□□□□ -1.661e-6■■□□□ 12.9
SRSF1Q07955 SRSF5-213ENST00000556330 546 ntTSL 27.8□□□□□ -1.165e-14■■□□□ 12.9
SRSF1Q07955 SRSF5-219ENST00000557460 939 ntTSL 57.38□□□□□ -1.235e-14■■□□□ 12.9
SRSF1Q07955 MICALL2-205ENST00000467783 639 ntTSL 316.35■□□□□ 0.211e-6■■□□□ 12.9
SRSF1Q07955 MICALL2-209ENST00000479007 1855 ntTSL 215.66■□□□□ 0.11e-6■■□□□ 12.9
SRSF1Q07955 MICALL2-204ENST00000467394 2080 ntTSL 215.28■□□□□ 0.041e-6■■□□□ 12.9
SRSF1Q07955 MICALL2-207ENST00000471899 899 ntTSL 214.86□□□□□ -0.031e-6■■□□□ 12.9
SRSF1Q07955 MICALL2-215ENST00000496184 2722 ntTSL 213.01□□□□□ -0.331e-6■■□□□ 12.9
SRSF1Q07955 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.24■□□□□ 0.356e-6■■□□□ 12.9
SRSF1Q07955 ATG4B-201ENST00000344376 1566 ntTSL 515.03■□□□□ -06e-6■■□□□ 12.9
SRSF1Q07955 ATG4B-225ENST00000494465 2365 ntTSL 513.27□□□□□ -0.296e-6■■□□□ 12.9
SRSF1Q07955 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.56e-6■■□□□ 12.9
SRSF1Q07955 ATG4B-220ENST00000482507 2414 ntTSL 1 (best)11.82□□□□□ -0.526e-6■■□□□ 12.9
SRSF1Q07955 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.37□□□□□ -0.596e-6■■□□□ 12.9
SRSF1Q07955 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.47■□□□□ 0.552e-8■■□□□ 12.9
SRSF1Q07955 D2HGDH-202ENST00000400769 2277 ntTSL 217.74■□□□□ 0.432e-8■■□□□ 12.9
SRSF1Q07955 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.182e-8■■□□□ 12.9
SRSF1Q07955 D2HGDH-206ENST00000436747 4549 ntTSL 1 (best)13.56□□□□□ -0.242e-8■■□□□ 12.9
SRSF1Q07955 SLC37A3-210ENST00000469193 647 ntTSL 319.89■□□□□ 0.773e-6■■□□□ 12.9
SRSF1Q07955 SLC37A3-208ENST00000464865 1228 ntTSL 216.11■□□□□ 0.173e-6■■□□□ 12.9
SRSF1Q07955 SLC37A3-204ENST00000460560 2111 ntTSL 516.02■□□□□ 0.163e-6■■□□□ 12.9
SRSF1Q07955 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.493e-6■■□□□ 12.9
SRSF1Q07955 SLC37A3-203ENST00000447932 3254 ntTSL 1 (best) BASIC11.24□□□□□ -0.613e-6■■□□□ 12.9
SRSF1Q07955 SLC37A3-222ENST00000490760 574 ntTSL 510.75□□□□□ -0.693e-6■■□□□ 12.9
SRSF1Q07955 SLC37A3-227ENST00000495257 573 ntTSL 410.6□□□□□ -0.713e-6■■□□□ 12.9
SRSF1Q07955 SLC37A3-205ENST00000461089 617 ntTSL 49.7□□□□□ -0.863e-6■■□□□ 12.9
SRSF1Q07955 SLC37A3-215ENST00000477571 3488 ntTSL 59.28□□□□□ -0.923e-6■■□□□ 12.9
SRSF1Q07955 SLC37A3-224ENST00000491505 544 ntTSL 27.23□□□□□ -1.253e-6■■□□□ 12.9
SRSF1Q07955 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC6.23□□□□□ -1.413e-6■■□□□ 12.9
SRSF1Q07955 SLC37A3-206ENST00000462881 551 ntTSL 44.49□□□□□ -1.693e-6■■□□□ 12.9
SRSF1Q07955 UNC13D-213ENST00000590762 848 ntTSL 522.54■■□□□ 1.21e-14■■□□□ 12.9
SRSF1Q07955 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.76■□□□□ 0.594e-9■■□□□ 12.9
SRSF1Q07955 DHPS-210ENST00000595912 895 ntTSL 217.03■□□□□ 0.324e-9■■□□□ 12.9
SRSF1Q07955 CDC37-202ENST00000588498 690 ntTSL 316.73■□□□□ 0.272e-21■■□□□ 12.9
SRSF1Q07955 UNC13D-203ENST00000585574 658 ntTSL 316.22■□□□□ 0.191e-14■■□□□ 12.9
SRSF1Q07955 SDHAP2-201ENST00000455183 2001 ntBASIC15.7■□□□□ 0.11e-14■■□□□ 12.9
SRSF1Q07955 LINC00969-207ENST00000429897 2131 ntTSL 214.97□□□□□ -0.011e-14■■□□□ 12.9
SRSF1Q07955 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.14e-9■■□□□ 12.9
SRSF1Q07955 LINC00969-242ENST00000601648 745 ntTSL 314.4□□□□□ -0.11e-14■■□□□ 12.9
SRSF1Q07955 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13.93□□□□□ -0.181e-14■■□□□ 12.9
SRSF1Q07955 UNC13D-205ENST00000586147 589 ntTSL 513.6□□□□□ -0.231e-14■■□□□ 12.9
SRSF1Q07955 DHPS-209ENST00000595844 909 ntTSL 213.51□□□□□ -0.254e-9■■□□□ 12.9
SRSF1Q07955 DHPS-203ENST00000593400 585 ntTSL 413.23□□□□□ -0.294e-9■■□□□ 12.9
SRSF1Q07955 DHPS-212ENST00000596847 646 ntTSL 513.17□□□□□ -0.34e-9■■□□□ 12.9
SRSF1Q07955 UNC13D-210ENST00000587504 1050 ntTSL 513.16□□□□□ -0.31e-14■■□□□ 12.9
SRSF1Q07955 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.38□□□□□ -0.434e-9■■□□□ 12.9
SRSF1Q07955 DHPS-205ENST00000593432 556 ntTSL 412.2□□□□□ -0.464e-9■■□□□ 12.9
SRSF1Q07955 DHPS-214ENST00000598246 553 ntTSL 311.53□□□□□ -0.564e-9■■□□□ 12.9
SRSF1Q07955 LINC00969-264ENST00000626089 792 ntTSL 511.5□□□□□ -0.571e-14■■□□□ 12.9
SRSF1Q07955 DHPS-221ENST00000601537 1176 ntTSL 1 (best)11.22□□□□□ -0.614e-9■■□□□ 12.9
SRSF1Q07955 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.71e-14■■□□□ 12.9
SRSF1Q07955 DHPS-220ENST00000600864 464 ntTSL 510.55□□□□□ -0.724e-9■■□□□ 12.9
SRSF1Q07955 DHPS-202ENST00000351660 1090 ntTSL 1 (best) BASIC10.43□□□□□ -0.744e-9■■□□□ 12.9
SRSF1Q07955 UNC13D-215ENST00000591563 4382 ntTSL 210.35□□□□□ -0.751e-14■■□□□ 12.9
SRSF1Q07955 LINC00969-276ENST00000626706 608 ntTSL 510.27□□□□□ -0.771e-14■■□□□ 12.9
SRSF1Q07955 UNC13D-209ENST00000587495 276 ntTSL 39.95□□□□□ -0.821e-14■■□□□ 12.9
SRSF1Q07955 DHPS-213ENST00000597152 605 ntTSL 59.83□□□□□ -0.844e-9■■□□□ 12.9
SRSF1Q07955 LINC00969-297ENST00000627767 929 ntTSL 2 BASIC9.83□□□□□ -0.841e-14■■□□□ 12.9
SRSF1Q07955 UNC13D-217ENST00000592386 930 ntTSL 59.72□□□□□ -0.851e-14■■□□□ 12.9
SRSF1Q07955 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC9.62□□□□□ -0.871e-14■■□□□ 12.9
SRSF1Q07955 DHPS-222ENST00000601639 1133 ntTSL 59.38□□□□□ -0.914e-9■■□□□ 12.9
SRSF1Q07955 LINC00969-212ENST00000445430 4208 ntTSL 1 (best) BASIC9.06□□□□□ -0.961e-14■■□□□ 12.9
SRSF1Q07955 LINC00969-261ENST00000625882 484 ntTSL 58.74□□□□□ -1.011e-14■■□□□ 12.9
SRSF1Q07955 DHPS-211ENST00000596162 595 ntTSL 38.71□□□□□ -1.024e-9■■□□□ 12.9
SRSF1Q07955 DHPS-215ENST00000598850 677 ntTSL 58.2□□□□□ -1.14e-9■■□□□ 12.9
SRSF1Q07955 DHPS-217ENST00000600451 498 ntTSL 37.49□□□□□ -1.214e-9■■□□□ 12.9
SRSF1Q07955 LINC00969-246ENST00000608699 415 ntTSL 56.63□□□□□ -1.351e-14■■□□□ 12.9
SRSF1Q07955 NECAB3-210ENST00000484824 596 ntTSL 218.59■□□□□ 0.572e-10■■□□□ 12.9
SRSF1Q07955 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.234e-15■■□□□ 12.9
SRSF1Q07955 RABL6-207ENST00000461992 763 ntTSL 1 (best)11.83□□□□□ -0.524e-15■■□□□ 12.9
SRSF1Q07955 RABL6-205ENST00000435930 3328 ntTSL 211.81□□□□□ -0.524e-15■■□□□ 12.9
SRSF1Q07955 RABL6-209ENST00000466096 3949 ntTSL 1 (best)11.44□□□□□ -0.584e-15■■□□□ 12.9
SRSF1Q07955 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.138e-7■■□□□ 12.9
SRSF1Q07955 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.728e-7■■□□□ 12.9
SRSF1Q07955 SLC2A4RG-207ENST00000493772 1328 ntTSL 1 (best)19.93■□□□□ 0.781e-7■■□□□ 12.8
SRSF1Q07955 SLC2A4RG-202ENST00000473157 991 ntTSL 317.95■□□□□ 0.461e-7■■□□□ 12.8
SRSF1Q07955 HNRNPM-212ENST00000598999 409 ntTSL 216.61■□□□□ 0.251e-7■■□□□ 12.8
SRSF1Q07955 PGGHG-205ENST00000474221 4418 ntTSL 211.55□□□□□ -0.561e-7■■□□□ 12.8
SRSF1Q07955 FTX-207ENST00000602576 574 ntTSL 411.43□□□□□ -0.581e-7■■□□□ 12.8
SRSF1Q07955 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC10.25□□□□□ -0.771e-7■■□□□ 12.8
SRSF1Q07955 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.851e-7■■□□□ 12.8
SRSF1Q07955 FTX-202ENST00000423992 696 ntTSL 59.73□□□□□ -0.851e-7■■□□□ 12.8
SRSF1Q07955 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC9.42□□□□□ -0.91e-7■■□□□ 12.8
SRSF1Q07955 FTX-203ENST00000429124 2597 ntTSL 28.75□□□□□ -1.011e-7■■□□□ 12.8
SRSF1Q07955 FTX-201ENST00000418855 579 ntTSL 28.46□□□□□ -1.061e-7■■□□□ 12.8
Retrieved 100 of 14,836 protein–RNA pairs in 84.7 ms