Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL20P78556 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL20P78556 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL20P78556 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL20P78556 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.33■□□□□ 0.04
CCL20P78556 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL20P78556 KRT16P2-201ENST00000414673 1423 ntBASIC15.33■□□□□ 0.04
CCL20P78556 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CCL20P78556 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL20P78556 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCL20P78556 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCL20P78556 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
CCL20P78556 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCL20P78556 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 AC090340.1-201ENST00000620778 4980 ntBASIC15.32■□□□□ 0.04
CCL20P78556 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCL20P78556 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCL20P78556 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.32■□□□□ 0.04
CCL20P78556 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCL20P78556 MIR3621-201ENST00000580529 85 ntBASIC15.32■□□□□ 0.04
CCL20P78556 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCL20P78556 ABALON-201ENST00000629058 1903 ntBASIC15.32■□□□□ 0.04
CCL20P78556 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.32■□□□□ 0.04
CCL20P78556 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCL20P78556 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.32■□□□□ 0.04
CCL20P78556 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.32■□□□□ 0.04
CCL20P78556 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CCL20P78556 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.32■□□□□ 0.04
CCL20P78556 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCL20P78556 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCL20P78556 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL20P78556 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCL20P78556 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.31■□□□□ 0.04
CCL20P78556 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCL20P78556 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.31■□□□□ 0.04
CCL20P78556 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.31■□□□□ 0.04
CCL20P78556 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.31■□□□□ 0.04
CCL20P78556 AC105233.4-201ENST00000642045 216 ntBASIC15.31■□□□□ 0.04
CCL20P78556 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL20P78556 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL20P78556 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL20P78556 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.31■□□□□ 0.04
CCL20P78556 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCL20P78556 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.3■□□□□ 0.04
CCL20P78556 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCL20P78556 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL20P78556 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL20P78556 MKRN4P-201ENST00000444706 1521 ntBASIC15.3■□□□□ 0.04
CCL20P78556 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL20P78556 DUX4L19-201ENST00000557448 1267 ntBASIC15.3■□□□□ 0.04
CCL20P78556 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CCL20P78556 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL20P78556 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL20P78556 AL512631.2-201ENST00000604634 923 ntBASIC15.3■□□□□ 0.04
CCL20P78556 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL20P78556 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms