Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
PRAMEP78395 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PRAMEP78395 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PRAMEP78395 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEP78395 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PRAMEP78395 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PRAMEP78395 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEP78395 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEP78395 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
PRAMEP78395 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.6■□□□□ 0.73
PRAMEP78395 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEP78395 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEP78395 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEP78395 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEP78395 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEP78395 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEP78395 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PRAMEP78395 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
PRAMEP78395 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PRAMEP78395 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEP78395 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PRAMEP78395 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEP78395 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEP78395 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEP78395 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PRAMEP78395 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
PRAMEP78395 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.6■□□□□ 0.73
PRAMEP78395 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PRAMEP78395 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
PRAMEP78395 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.59■□□□□ 0.73
PRAMEP78395 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEP78395 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 UNC93B4-201ENST00000505679 747 ntBASIC19.59■□□□□ 0.73
PRAMEP78395 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEP78395 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.59■□□□□ 0.73
PRAMEP78395 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PRAMEP78395 AP006587.1-201ENST00000534129 1502 ntBASIC19.59■□□□□ 0.73
PRAMEP78395 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PRAMEP78395 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PRAMEP78395 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PRAMEP78395 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.59■□□□□ 0.73
PRAMEP78395 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEP78395 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEP78395 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEP78395 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PRAMEP78395 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEP78395 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEP78395 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.58■□□□□ 0.73
PRAMEP78395 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.58■□□□□ 0.73
PRAMEP78395 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PRAMEP78395 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEP78395 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.58■□□□□ 0.73
PRAMEP78395 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRAMEP78395 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEP78395 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEP78395 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
PRAMEP78395 RNA5SP413-201ENST00000516373 109 ntBASIC19.58■□□□□ 0.72
PRAMEP78395 UNC93B5-201ENST00000530315 699 ntBASIC19.58■□□□□ 0.72
PRAMEP78395 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEP78395 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEP78395 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEP78395 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEP78395 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PRAMEP78395 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PRAMEP78395 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEP78395 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEP78395 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEP78395 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRAMEP78395 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.58■□□□□ 0.72
PRAMEP78395 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.57■□□□□ 0.72
PRAMEP78395 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEP78395 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEP78395 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEP78395 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.57■□□□□ 0.72
PRAMEP78395 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.57■□□□□ 0.72
PRAMEP78395 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEP78395 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PRAMEP78395 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms