Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.55■□□□□ 0.88
ERVFC1P60507 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ERVFC1P60507 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERVFC1P60507 AC116407.4-201ENST00000623319 1061 ntBASIC20.55■□□□□ 0.88
ERVFC1P60507 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERVFC1P60507 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERVFC1P60507 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.55■□□□□ 0.88
ERVFC1P60507 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERVFC1P60507 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ERVFC1P60507 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
ERVFC1P60507 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ERVFC1P60507 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
ERVFC1P60507 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.54■□□□□ 0.88
ERVFC1P60507 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERVFC1P60507 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ERVFC1P60507 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERVFC1P60507 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.54■□□□□ 0.88
ERVFC1P60507 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ERVFC1P60507 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERVFC1P60507 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.54■□□□□ 0.88
ERVFC1P60507 TPM4P1-201ENST00000436100 807 ntBASIC20.54■□□□□ 0.88
ERVFC1P60507 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.54■□□□□ 0.88
ERVFC1P60507 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERVFC1P60507 AC008622.2-201ENST00000617006 1229 ntBASIC20.54■□□□□ 0.88
ERVFC1P60507 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ERVFC1P60507 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
ERVFC1P60507 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
ERVFC1P60507 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERVFC1P60507 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.54■□□□□ 0.88
ERVFC1P60507 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.54■□□□□ 0.88
ERVFC1P60507 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERVFC1P60507 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERVFC1P60507 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.53■□□□□ 0.88
ERVFC1P60507 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.53■□□□□ 0.88
ERVFC1P60507 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERVFC1P60507 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERVFC1P60507 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.53■□□□□ 0.88
ERVFC1P60507 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.53■□□□□ 0.88
ERVFC1P60507 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.53■□□□□ 0.88
ERVFC1P60507 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.53■□□□□ 0.88
ERVFC1P60507 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.53■□□□□ 0.88
ERVFC1P60507 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.53■□□□□ 0.88
ERVFC1P60507 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.53■□□□□ 0.88
ERVFC1P60507 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.53■□□□□ 0.88
ERVFC1P60507 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERVFC1P60507 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERVFC1P60507 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERVFC1P60507 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERVFC1P60507 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.53■□□□□ 0.88
ERVFC1P60507 AP001271.2-201ENST00000624018 1556 ntBASIC20.53■□□□□ 0.88
ERVFC1P60507 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERVFC1P60507 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.53■□□□□ 0.88
ERVFC1P60507 FEM1AP1-201ENST00000431297 1995 ntBASIC20.53■□□□□ 0.88
ERVFC1P60507 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERVFC1P60507 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.53■□□□□ 0.88
ERVFC1P60507 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ERVFC1P60507 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERVFC1P60507 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
ERVFC1P60507 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.53■□□□□ 0.88
ERVFC1P60507 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ERVFC1P60507 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.53■□□□□ 0.88
ERVFC1P60507 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.53■□□□□ 0.88
ERVFC1P60507 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.53■□□□□ 0.88
ERVFC1P60507 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERVFC1P60507 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERVFC1P60507 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.52■□□□□ 0.88
ERVFC1P60507 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.52■□□□□ 0.88
ERVFC1P60507 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERVFC1P60507 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
ERVFC1P60507 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERVFC1P60507 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.52■□□□□ 0.88
ERVFC1P60507 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERVFC1P60507 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERVFC1P60507 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERVFC1P60507 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERVFC1P60507 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.52■□□□□ 0.88
ERVFC1P60507 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ERVFC1P60507 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.52■□□□□ 0.88
ERVFC1P60507 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.52■□□□□ 0.88
ERVFC1P60507 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.52■□□□□ 0.88
ERVFC1P60507 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.52■□□□□ 0.88
ERVFC1P60507 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ERVFC1P60507 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
ERVFC1P60507 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.52■□□□□ 0.87
ERVFC1P60507 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.51■□□□□ 0.87
ERVFC1P60507 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERVFC1P60507 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERVFC1P60507 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.51■□□□□ 0.87
ERVFC1P60507 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERVFC1P60507 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERVFC1P60507 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ERVFC1P60507 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERVFC1P60507 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERVFC1P60507 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.51■□□□□ 0.87
ERVFC1P60507 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.51■□□□□ 0.87
ERVFC1P60507 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.51■□□□□ 0.87
ERVFC1P60507 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
ERVFC1P60507 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.51■□□□□ 0.87
ERVFC1P60507 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ERVFC1P60507 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms