Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CMC4P56277 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CMC4P56277 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CMC4P56277 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CMC4P56277 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMC4P56277 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CMC4P56277 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.52□□□□□ -0.09
CMC4P56277 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMC4P56277 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.52□□□□□ -0.09
CMC4P56277 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CMC4P56277 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
CMC4P56277 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CMC4P56277 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.52□□□□□ -0.09
CMC4P56277 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMC4P56277 AC090340.1-201ENST00000620778 4980 ntBASIC14.52□□□□□ -0.09
CMC4P56277 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CMC4P56277 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CMC4P56277 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CMC4P56277 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CMC4P56277 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.51□□□□□ -0.09
CMC4P56277 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CMC4P56277 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.51□□□□□ -0.09
CMC4P56277 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.51□□□□□ -0.09
CMC4P56277 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CMC4P56277 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CMC4P56277 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.51□□□□□ -0.09
CMC4P56277 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.51□□□□□ -0.09
CMC4P56277 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.51□□□□□ -0.09
CMC4P56277 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 AC098590.1-201ENST00000468126 897 ntBASIC14.51□□□□□ -0.09
CMC4P56277 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CMC4P56277 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.51□□□□□ -0.09
CMC4P56277 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.51□□□□□ -0.09
CMC4P56277 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CMC4P56277 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.51□□□□□ -0.09
CMC4P56277 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CMC4P56277 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CMC4P56277 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.5□□□□□ -0.09
CMC4P56277 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CMC4P56277 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.5□□□□□ -0.09
CMC4P56277 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.5□□□□□ -0.09
CMC4P56277 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.5□□□□□ -0.09
CMC4P56277 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.5□□□□□ -0.09
CMC4P56277 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.5□□□□□ -0.09
CMC4P56277 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.5□□□□□ -0.09
CMC4P56277 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.5□□□□□ -0.09
CMC4P56277 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.5□□□□□ -0.09
CMC4P56277 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.5□□□□□ -0.09
CMC4P56277 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.5□□□□□ -0.09
CMC4P56277 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.5□□□□□ -0.09
CMC4P56277 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.5□□□□□ -0.09
CMC4P56277 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.5□□□□□ -0.09
CMC4P56277 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.5□□□□□ -0.09
CMC4P56277 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CMC4P56277 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms