Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX2P50458 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LHX2P50458 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.42■□□□□ 0.38
LHX2P50458 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LHX2P50458 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX2P50458 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.42■□□□□ 0.38
LHX2P50458 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX2P50458 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX2P50458 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX2P50458 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.42■□□□□ 0.38
LHX2P50458 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LHX2P50458 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LHX2P50458 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX2P50458 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 MMP23A-201ENST00000234610 1017 ntBASIC17.41■□□□□ 0.38
LHX2P50458 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LHX2P50458 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
LHX2P50458 Z85996.1-201ENST00000494644 937 ntBASIC17.41■□□□□ 0.38
LHX2P50458 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.41■□□□□ 0.38
LHX2P50458 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX2P50458 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.41■□□□□ 0.38
LHX2P50458 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LHX2P50458 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LHX2P50458 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LHX2P50458 LINC01465-201ENST00000408887 1940 ntBASIC17.41■□□□□ 0.38
LHX2P50458 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LHX2P50458 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX2P50458 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX2P50458 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX2P50458 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX2P50458 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.4■□□□□ 0.38
LHX2P50458 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.4■□□□□ 0.38
LHX2P50458 DGCR10-201ENST00000609839 495 ntBASIC17.4■□□□□ 0.38
LHX2P50458 AC130371.2-201ENST00000619443 611 ntBASIC17.4■□□□□ 0.38
LHX2P50458 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.4■□□□□ 0.38
LHX2P50458 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LHX2P50458 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LHX2P50458 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX2P50458 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.4■□□□□ 0.38
LHX2P50458 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.4■□□□□ 0.38
LHX2P50458 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.4■□□□□ 0.38
LHX2P50458 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LHX2P50458 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
LHX2P50458 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LHX2P50458 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
LHX2P50458 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LHX2P50458 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LHX2P50458 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.39■□□□□ 0.37
LHX2P50458 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.39■□□□□ 0.37
LHX2P50458 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.39■□□□□ 0.37
LHX2P50458 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.39■□□□□ 0.37
LHX2P50458 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.39■□□□□ 0.37
LHX2P50458 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.39■□□□□ 0.37
LHX2P50458 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 MIR1238-201ENST00000408483 83 ntBASIC17.39■□□□□ 0.37
LHX2P50458 AC004951.3-201ENST00000418645 1148 ntBASIC17.39■□□□□ 0.37
LHX2P50458 AC008040.2-201ENST00000461049 708 ntBASIC17.39■□□□□ 0.37
LHX2P50458 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.39■□□□□ 0.37
LHX2P50458 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.39■□□□□ 0.37
LHX2P50458 FITM1-202ENST00000559294 800 ntBASIC17.39■□□□□ 0.37
LHX2P50458 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.39■□□□□ 0.37
LHX2P50458 AC011298.2-201ENST00000617989 482 ntBASIC17.39■□□□□ 0.37
LHX2P50458 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.39■□□□□ 0.37
LHX2P50458 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LHX2P50458 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LHX2P50458 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms