Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
BRCC3P46736 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRCC3P46736 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRCC3P46736 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRCC3P46736 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
BRCC3P46736 KRT18P22-201ENST00000402024 1347 ntBASIC20.75■□□□□ 0.91
BRCC3P46736 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCC3P46736 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCC3P46736 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCC3P46736 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.74■□□□□ 0.91
BRCC3P46736 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
BRCC3P46736 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.74■□□□□ 0.91
BRCC3P46736 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
BRCC3P46736 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.74■□□□□ 0.91
BRCC3P46736 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.74■□□□□ 0.91
BRCC3P46736 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.74■□□□□ 0.91
BRCC3P46736 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.74■□□□□ 0.91
BRCC3P46736 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.74■□□□□ 0.91
BRCC3P46736 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRCC3P46736 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRCC3P46736 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.73■□□□□ 0.91
BRCC3P46736 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BRCC3P46736 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRCC3P46736 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRCC3P46736 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRCC3P46736 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BRCC3P46736 INGX-201ENST00000359239 846 ntBASIC20.73■□□□□ 0.91
BRCC3P46736 KRT18P57-201ENST00000443599 1254 ntBASIC20.73■□□□□ 0.91
BRCC3P46736 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.73■□□□□ 0.91
BRCC3P46736 C2orf69P3-201ENST00000565542 1120 ntBASIC20.73■□□□□ 0.91
BRCC3P46736 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRCC3P46736 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BRCC3P46736 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRCC3P46736 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRCC3P46736 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
BRCC3P46736 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.72■□□□□ 0.91
BRCC3P46736 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BRCC3P46736 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRCC3P46736 AC113347.1-201ENST00000413321 391 ntBASIC20.72■□□□□ 0.91
BRCC3P46736 MFAP1P1-201ENST00000442257 1255 ntBASIC20.72■□□□□ 0.91
BRCC3P46736 SLC25A3P1-201ENST00000443844 931 ntBASIC20.72■□□□□ 0.91
BRCC3P46736 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
BRCC3P46736 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.72■□□□□ 0.91
BRCC3P46736 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRCC3P46736 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.72■□□□□ 0.91
BRCC3P46736 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRCC3P46736 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.72■□□□□ 0.91
BRCC3P46736 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.72■□□□□ 0.91
BRCC3P46736 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRCC3P46736 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.72■□□□□ 0.91
BRCC3P46736 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.72■□□□□ 0.91
BRCC3P46736 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
BRCC3P46736 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRCC3P46736 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRCC3P46736 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.71■□□□□ 0.91
BRCC3P46736 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.71■□□□□ 0.91
BRCC3P46736 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCC3P46736 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCC3P46736 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.71■□□□□ 0.91
BRCC3P46736 ECEL1P2-202ENST00000465689 757 ntBASIC20.71■□□□□ 0.91
BRCC3P46736 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.71■□□□□ 0.91
BRCC3P46736 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BRCC3P46736 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.71■□□□□ 0.91
BRCC3P46736 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BRCC3P46736 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.71■□□□□ 0.91
BRCC3P46736 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.71■□□□□ 0.91
BRCC3P46736 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCC3P46736 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCC3P46736 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCC3P46736 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCC3P46736 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.91
BRCC3P46736 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
BRCC3P46736 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
BRCC3P46736 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BRCC3P46736 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BRCC3P46736 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.7■□□□□ 0.9
BRCC3P46736 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BRCC3P46736 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCC3P46736 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BRCC3P46736 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.7■□□□□ 0.9
BRCC3P46736 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCC3P46736 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCC3P46736 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCC3P46736 TSPY14P-201ENST00000303979 915 ntBASIC20.7■□□□□ 0.9
BRCC3P46736 TERF1P1-201ENST00000311003 1181 ntBASIC20.7■□□□□ 0.9
BRCC3P46736 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms