Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
NCAPD3P42695 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
NCAPD3P42695 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC34.57■■■■□ 3.13
NCAPD3P42695 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC34.57■■■■□ 3.12
NCAPD3P42695 ERF-202ENST00000440177 2032 ntTSL 2 BASIC34.57■■■■□ 3.12
NCAPD3P42695 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
NCAPD3P42695 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC34.57■■■■□ 3.12
NCAPD3P42695 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
NCAPD3P42695 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
NCAPD3P42695 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
NCAPD3P42695 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC34.57■■■■□ 3.12
NCAPD3P42695 GALC-202ENST00000393568 2054 ntTSL 2 BASIC34.57■■■■□ 3.12
NCAPD3P42695 LINC01465-201ENST00000408887 1940 ntBASIC34.56■■■■□ 3.12
NCAPD3P42695 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC34.56■■■■□ 3.12
NCAPD3P42695 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
NCAPD3P42695 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC34.56■■■■□ 3.12
NCAPD3P42695 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC34.56■■■■□ 3.12
NCAPD3P42695 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC34.56■■■■□ 3.12
NCAPD3P42695 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC34.55■■■■□ 3.12
NCAPD3P42695 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
NCAPD3P42695 PLK5-205ENST00000642079 1969 ntBASIC34.55■■■■□ 3.12
NCAPD3P42695 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
NCAPD3P42695 TPSP2-201ENST00000561760 610 ntBASIC34.55■■■■□ 3.12
NCAPD3P42695 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC34.55■■■■□ 3.12
NCAPD3P42695 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
NCAPD3P42695 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
NCAPD3P42695 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
NCAPD3P42695 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC34.55■■■■□ 3.12
NCAPD3P42695 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC34.55■■■■□ 3.12
NCAPD3P42695 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
NCAPD3P42695 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
NCAPD3P42695 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC34.54■■■■□ 3.12
NCAPD3P42695 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
NCAPD3P42695 CHCHD2P8-201ENST00000429873 447 ntBASIC34.54■■■■□ 3.12
NCAPD3P42695 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC34.54■■■■□ 3.12
NCAPD3P42695 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC34.54■■■■□ 3.12
NCAPD3P42695 KRT8P26-201ENST00000534154 1276 ntBASIC34.54■■■■□ 3.12
NCAPD3P42695 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC34.54■■■■□ 3.12
NCAPD3P42695 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
NCAPD3P42695 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC34.54■■■■□ 3.12
NCAPD3P42695 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC34.54■■■■□ 3.12
NCAPD3P42695 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
NCAPD3P42695 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
NCAPD3P42695 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC34.54■■■■□ 3.12
NCAPD3P42695 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
NCAPD3P42695 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
NCAPD3P42695 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
NCAPD3P42695 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC34.53■■■■□ 3.12
NCAPD3P42695 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC34.53■■■■□ 3.12
NCAPD3P42695 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC34.53■■■■□ 3.12
NCAPD3P42695 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
NCAPD3P42695 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC34.53■■■■□ 3.12
NCAPD3P42695 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC34.53■■■■□ 3.12
NCAPD3P42695 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC34.53■■■■□ 3.12
NCAPD3P42695 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
NCAPD3P42695 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
NCAPD3P42695 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
NCAPD3P42695 AC139530.3-201ENST00000620344 690 ntBASIC34.52■■■■□ 3.12
NCAPD3P42695 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC34.52■■■■□ 3.12
NCAPD3P42695 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC34.52■■■■□ 3.12
NCAPD3P42695 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
NCAPD3P42695 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
NCAPD3P42695 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
NCAPD3P42695 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
NCAPD3P42695 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC34.52■■■■□ 3.12
NCAPD3P42695 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC34.52■■■■□ 3.12
NCAPD3P42695 DRAXINP1-201ENST00000437611 948 ntBASIC34.52■■■■□ 3.12
NCAPD3P42695 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
NCAPD3P42695 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC34.52■■■■□ 3.12
NCAPD3P42695 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
NCAPD3P42695 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
NCAPD3P42695 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
NCAPD3P42695 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.12
NCAPD3P42695 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC34.51■■■■□ 3.11
NCAPD3P42695 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
NCAPD3P42695 TBC1D3P2-202ENST00000577902 1649 ntBASIC34.51■■■■□ 3.11
NCAPD3P42695 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
NCAPD3P42695 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC34.51■■■■□ 3.11
NCAPD3P42695 AC034232.1-201ENST00000506026 1064 ntBASIC34.51■■■■□ 3.11
NCAPD3P42695 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC34.51■■■■□ 3.11
NCAPD3P42695 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
NCAPD3P42695 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
NCAPD3P42695 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
NCAPD3P42695 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
NCAPD3P42695 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
NCAPD3P42695 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC34.5■■■■□ 3.11
NCAPD3P42695 TSPY12P-201ENST00000421279 868 ntBASIC34.5■■■■□ 3.11
NCAPD3P42695 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC34.5■■■■□ 3.11
NCAPD3P42695 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC34.5■■■■□ 3.11
NCAPD3P42695 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC34.5■■■■□ 3.11
NCAPD3P42695 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
NCAPD3P42695 BMF-207ENST00000559701 630 ntTSL 3 BASIC34.5■■■■□ 3.11
NCAPD3P42695 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
NCAPD3P42695 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
NCAPD3P42695 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC34.5■■■■□ 3.11
NCAPD3P42695 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC34.5■■■■□ 3.11
NCAPD3P42695 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC34.5■■■■□ 3.11
NCAPD3P42695 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC34.49■■■■□ 3.11
NCAPD3P42695 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC34.49■■■■□ 3.11
NCAPD3P42695 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC34.49■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms