Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A4P31645 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC6A4P31645 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC6A4P31645 AC079598.2-202ENST00000546624 1451 ntBASIC20.03■□□□□ 0.8
SLC6A4P31645 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC6A4P31645 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A4P31645 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A4P31645 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A4P31645 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
SLC6A4P31645 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A4P31645 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A4P31645 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLC6A4P31645 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A4P31645 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A4P31645 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A4P31645 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
SLC6A4P31645 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A4P31645 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A4P31645 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A4P31645 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A4P31645 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.02■□□□□ 0.8
SLC6A4P31645 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC6A4P31645 AC026271.3-201ENST00000571884 352 ntBASIC20.02■□□□□ 0.8
SLC6A4P31645 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A4P31645 MIR6786-201ENST00000616843 113 ntBASIC20.02■□□□□ 0.8
SLC6A4P31645 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SLC6A4P31645 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A4P31645 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A4P31645 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SLC6A4P31645 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A4P31645 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A4P31645 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC6A4P31645 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SLC6A4P31645 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SLC6A4P31645 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.02■□□□□ 0.79
SLC6A4P31645 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.02■□□□□ 0.79
SLC6A4P31645 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC6A4P31645 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SLC6A4P31645 AC073130.3-201ENST00000624389 2278 ntBASIC20.01■□□□□ 0.79
SLC6A4P31645 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC6A4P31645 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC6A4P31645 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC6A4P31645 B3GAT3P1-201ENST00000471720 806 ntBASIC20.01■□□□□ 0.79
SLC6A4P31645 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC6A4P31645 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC6A4P31645 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SLC6A4P31645 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A4P31645 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SLC6A4P31645 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLC6A4P31645 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20■□□□□ 0.79
SLC6A4P31645 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A4P31645 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20■□□□□ 0.79
SLC6A4P31645 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SLC6A4P31645 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC6A4P31645 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A4P31645 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A4P31645 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC6A4P31645 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20■□□□□ 0.79
SLC6A4P31645 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A4P31645 Z85996.1-201ENST00000494644 937 ntBASIC20■□□□□ 0.79
SLC6A4P31645 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A4P31645 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC6A4P31645 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20■□□□□ 0.79
SLC6A4P31645 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20■□□□□ 0.79
SLC6A4P31645 AP000525.1-201ENST00000608286 694 ntBASIC20■□□□□ 0.79
SLC6A4P31645 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20■□□□□ 0.79
SLC6A4P31645 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC6A4P31645 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A4P31645 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLC6A4P31645 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20■□□□□ 0.79
SLC6A4P31645 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20■□□□□ 0.79
SLC6A4P31645 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SLC6A4P31645 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SLC6A4P31645 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SLC6A4P31645 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A4P31645 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SLC6A4P31645 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A4P31645 AC008040.2-201ENST00000461049 708 ntBASIC19.99■□□□□ 0.79
SLC6A4P31645 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A4P31645 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC6A4P31645 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC6A4P31645 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC6A4P31645 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.99■□□□□ 0.79
SLC6A4P31645 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A4P31645 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A4P31645 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A4P31645 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC6A4P31645 RCC2P6-201ENST00000526625 1557 ntBASIC19.99■□□□□ 0.79
SLC6A4P31645 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms