Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LCN1P31025 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LCN1P31025 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.02■□□□□ 0.47
LCN1P31025 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LCN1P31025 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
LCN1P31025 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.02■□□□□ 0.47
LCN1P31025 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LCN1P31025 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LCN1P31025 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
LCN1P31025 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCN1P31025 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCN1P31025 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
LCN1P31025 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.01■□□□□ 0.47
LCN1P31025 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCN1P31025 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LCN1P31025 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCN1P31025 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
LCN1P31025 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCN1P31025 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LCN1P31025 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.01■□□□□ 0.47
LCN1P31025 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.01■□□□□ 0.47
LCN1P31025 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
LCN1P31025 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCN1P31025 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
LCN1P31025 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.01■□□□□ 0.47
LCN1P31025 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LCN1P31025 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LCN1P31025 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LCN1P31025 AFG3L1P-217ENST00000557444 2447 ntBASIC18■□□□□ 0.47
LCN1P31025 AC125437.2-201ENST00000625180 2167 ntBASIC18■□□□□ 0.47
LCN1P31025 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18■□□□□ 0.47
LCN1P31025 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 POU5F1P3-201ENST00000428824 1078 ntBASIC18■□□□□ 0.47
LCN1P31025 TUBB8P6-201ENST00000436895 1288 ntBASIC18■□□□□ 0.47
LCN1P31025 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
LCN1P31025 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18■□□□□ 0.47
LCN1P31025 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
LCN1P31025 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LCN1P31025 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.99■□□□□ 0.47
LCN1P31025 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCN1P31025 KRT8P8-201ENST00000434750 1448 ntBASIC17.99■□□□□ 0.47
LCN1P31025 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCN1P31025 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCN1P31025 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCN1P31025 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.99■□□□□ 0.47
LCN1P31025 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LCN1P31025 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.99■□□□□ 0.47
LCN1P31025 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.99■□□□□ 0.47
LCN1P31025 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.99■□□□□ 0.47
LCN1P31025 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.99■□□□□ 0.47
LCN1P31025 AC004264.1-201ENST00000608354 794 ntBASIC17.99■□□□□ 0.47
LCN1P31025 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LCN1P31025 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCN1P31025 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCN1P31025 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.99■□□□□ 0.47
LCN1P31025 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LCN1P31025 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LCN1P31025 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LCN1P31025 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
LCN1P31025 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.98■□□□□ 0.47
LCN1P31025 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
LCN1P31025 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.98■□□□□ 0.47
LCN1P31025 AC133681.1-201ENST00000465482 601 ntBASIC17.98■□□□□ 0.47
LCN1P31025 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.98■□□□□ 0.47
LCN1P31025 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.98■□□□□ 0.47
LCN1P31025 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.98■□□□□ 0.47
LCN1P31025 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.98■□□□□ 0.47
LCN1P31025 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.98■□□□□ 0.47
LCN1P31025 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 NBPF21P-201ENST00000425093 1451 ntBASIC17.98■□□□□ 0.47
LCN1P31025 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.98■□□□□ 0.47
LCN1P31025 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LCN1P31025 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.98■□□□□ 0.47
LCN1P31025 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.98■□□□□ 0.47
LCN1P31025 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCN1P31025 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms