Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH3P22223 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.04■□□□□ 0.64
CDH3P22223 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH3P22223 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH3P22223 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH3P22223 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDH3P22223 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDH3P22223 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH3P22223 AL135905.2-201ENST00000584934 1404 ntBASIC19.03■□□□□ 0.64
CDH3P22223 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH3P22223 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 AL596275.1-201ENST00000423464 877 ntBASIC19.03■□□□□ 0.64
CDH3P22223 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CDH3P22223 KRT16P5-201ENST00000455284 522 ntBASIC19.03■□□□□ 0.64
CDH3P22223 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.03■□□□□ 0.64
CDH3P22223 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH3P22223 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDH3P22223 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH3P22223 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 PHGDH-210ENST00000641115 1638 ntBASIC19.03■□□□□ 0.64
CDH3P22223 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH3P22223 AP005212.1-201ENST00000581547 1997 ntBASIC19.02■□□□□ 0.64
CDH3P22223 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH3P22223 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
CDH3P22223 AC116351.2-201ENST00000606540 1585 ntBASIC19.02■□□□□ 0.64
CDH3P22223 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CDH3P22223 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH3P22223 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH3P22223 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH3P22223 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CDH3P22223 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.02■□□□□ 0.64
CDH3P22223 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH3P22223 RPS2P55-201ENST00000397318 883 ntBASIC19.02■□□□□ 0.64
CDH3P22223 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH3P22223 AC012618.2-201ENST00000428058 849 ntBASIC19.02■□□□□ 0.64
CDH3P22223 AC107956.1-201ENST00000494359 873 ntBASIC19.02■□□□□ 0.64
CDH3P22223 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH3P22223 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH3P22223 RARRES2P10-201ENST00000564312 460 ntBASIC19.02■□□□□ 0.64
CDH3P22223 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.02■□□□□ 0.64
CDH3P22223 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH3P22223 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH3P22223 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH3P22223 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDH3P22223 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH3P22223 AC018553.1-201ENST00000616682 1458 ntBASIC19.02■□□□□ 0.63
CDH3P22223 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH3P22223 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CDH3P22223 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH3P22223 BX119927.1-201ENST00000636596 1552 ntBASIC19.02■□□□□ 0.63
CDH3P22223 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH3P22223 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CDH3P22223 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH3P22223 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH3P22223 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH3P22223 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CDH3P22223 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH3P22223 AP001412.1-201ENST00000608405 714 ntBASIC19.01■□□□□ 0.63
CDH3P22223 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CDH3P22223 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CDH3P22223 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH3P22223 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH3P22223 BX323043.1-201ENST00000641006 1765 ntBASIC19.01■□□□□ 0.63
CDH3P22223 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH3P22223 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH3P22223 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH3P22223 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH3P22223 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19■□□□□ 0.63
CDH3P22223 AP006587.1-201ENST00000534129 1502 ntBASIC19■□□□□ 0.63
CDH3P22223 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDH3P22223 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH3P22223 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDH3P22223 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CDH3P22223 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH3P22223 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH3P22223 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms