Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.17■□□□□ 0.66
RBP1P09455 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.17■□□□□ 0.66
RBP1P09455 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.17■□□□□ 0.66
RBP1P09455 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.17■□□□□ 0.66
RBP1P09455 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RBP1P09455 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.17■□□□□ 0.66
RBP1P09455 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.17■□□□□ 0.66
RBP1P09455 RAP2CP1-201ENST00000605103 478 ntBASIC19.17■□□□□ 0.66
RBP1P09455 AL121832.2-201ENST00000610979 668 ntBASIC19.17■□□□□ 0.66
RBP1P09455 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RBP1P09455 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RBP1P09455 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.17■□□□□ 0.66
RBP1P09455 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RBP1P09455 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.16■□□□□ 0.66
RBP1P09455 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RBP1P09455 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
RBP1P09455 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.16■□□□□ 0.66
RBP1P09455 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RBP1P09455 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.16■□□□□ 0.66
RBP1P09455 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.16■□□□□ 0.66
RBP1P09455 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.16■□□□□ 0.66
RBP1P09455 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 DUSP5P2-201ENST00000426873 1033 ntBASIC19.16■□□□□ 0.66
RBP1P09455 CROCCP5-201ENST00000436658 830 ntBASIC19.16■□□□□ 0.66
RBP1P09455 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.16■□□□□ 0.66
RBP1P09455 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.16■□□□□ 0.66
RBP1P09455 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.16■□□□□ 0.66
RBP1P09455 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RBP1P09455 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 ZNF815P-204ENST00000434898 1737 ntBASIC19.16■□□□□ 0.66
RBP1P09455 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.16■□□□□ 0.66
RBP1P09455 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.16■□□□□ 0.66
RBP1P09455 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBP1P09455 AC093503.3-201ENST00000624917 2352 ntBASIC19.15■□□□□ 0.66
RBP1P09455 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.15■□□□□ 0.66
RBP1P09455 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.15■□□□□ 0.66
RBP1P09455 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 AC083906.2-201ENST00000511578 360 ntBASIC19.15■□□□□ 0.66
RBP1P09455 AC092118.2-201ENST00000613495 667 ntBASIC19.15■□□□□ 0.66
RBP1P09455 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 AC141586.3-201ENST00000562166 1838 ntBASIC19.15■□□□□ 0.66
RBP1P09455 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.15■□□□□ 0.66
RBP1P09455 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.15■□□□□ 0.66
RBP1P09455 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RBP1P09455 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBP1P09455 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.15■□□□□ 0.66
RBP1P09455 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RBP1P09455 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RBP1P09455 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBP1P09455 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RBP1P09455 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBP1P09455 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RBP1P09455 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBP1P09455 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBP1P09455 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.14■□□□□ 0.65
RBP1P09455 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.14■□□□□ 0.65
RBP1P09455 AC006557.6-201ENST00000623071 864 ntBASIC19.14■□□□□ 0.65
RBP1P09455 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBP1P09455 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
RBP1P09455 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.14■□□□□ 0.65
RBP1P09455 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RBP1P09455 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBP1P09455 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.14■□□□□ 0.65
RBP1P09455 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBP1P09455 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RBP1P09455 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RBP1P09455 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBP1P09455 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBP1P09455 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms