Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TPM3P06753 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.82■■□□□ 1.08
TPM3P06753 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TPM3P06753 AC004854.2-201ENST00000608450 1441 ntBASIC21.81■■□□□ 1.08
TPM3P06753 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TPM3P06753 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.81■■□□□ 1.08
TPM3P06753 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TPM3P06753 YBX1P1-201ENST00000445822 960 ntBASIC21.81■■□□□ 1.08
TPM3P06753 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TPM3P06753 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.81■■□□□ 1.08
TPM3P06753 AL591742.1-201ENST00000604433 565 ntBASIC21.81■■□□□ 1.08
TPM3P06753 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TPM3P06753 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TPM3P06753 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TPM3P06753 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TPM3P06753 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TPM3P06753 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.8■■□□□ 1.08
TPM3P06753 PTBP1P-201ENST00000554374 1601 ntBASIC21.8■■□□□ 1.08
TPM3P06753 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 AC090164.3-201ENST00000610780 2143 ntBASIC21.8■■□□□ 1.08
TPM3P06753 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.8■■□□□ 1.08
TPM3P06753 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.8■■□□□ 1.08
TPM3P06753 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
TPM3P06753 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TPM3P06753 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.8■■□□□ 1.08
TPM3P06753 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 AL031963.3-201ENST00000606441 850 ntBASIC21.8■■□□□ 1.08
TPM3P06753 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.8■■□□□ 1.08
TPM3P06753 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.8■■□□□ 1.08
TPM3P06753 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TPM3P06753 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TPM3P06753 KRT8P20-201ENST00000423953 1409 ntBASIC21.8■■□□□ 1.08
TPM3P06753 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
TPM3P06753 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TPM3P06753 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TPM3P06753 AC104581.1-202ENST00000635932 2618 ntBASIC21.79■■□□□ 1.08
TPM3P06753 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.79■■□□□ 1.08
TPM3P06753 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TPM3P06753 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.79■■□□□ 1.08
TPM3P06753 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TPM3P06753 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.79■■□□□ 1.08
TPM3P06753 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TPM3P06753 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TPM3P06753 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.79■■□□□ 1.08
TPM3P06753 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.79■■□□□ 1.08
TPM3P06753 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TPM3P06753 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TPM3P06753 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TPM3P06753 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TPM3P06753 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TPM3P06753 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TPM3P06753 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.79■■□□□ 1.08
TPM3P06753 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.79■■□□□ 1.08
TPM3P06753 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.78■■□□□ 1.08
TPM3P06753 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM3P06753 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
TPM3P06753 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.78■■□□□ 1.08
TPM3P06753 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.78■■□□□ 1.08
TPM3P06753 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.78■■□□□ 1.08
TPM3P06753 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM3P06753 KRT18P14-201ENST00000534205 1250 ntBASIC21.78■■□□□ 1.08
TPM3P06753 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.78■■□□□ 1.08
TPM3P06753 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.78■■□□□ 1.08
TPM3P06753 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM3P06753 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM3P06753 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM3P06753 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TPM3P06753 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM3P06753 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM3P06753 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM3P06753 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.78■■□□□ 1.08
TPM3P06753 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.78■■□□□ 1.08
TPM3P06753 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM3P06753 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.78■■□□□ 1.08
TPM3P06753 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TPM3P06753 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.78■■□□□ 1.08
TPM3P06753 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TPM3P06753 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.77■■□□□ 1.08
TPM3P06753 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.77■■□□□ 1.08
TPM3P06753 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TPM3P06753 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms