Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
P04436 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P04436 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.8■□□□□ 0.44
P04436 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P04436 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.8■□□□□ 0.44
P04436 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.8■□□□□ 0.44
P04436 HLA-A-209ENST00000638375 975 ntBASIC17.8■□□□□ 0.44
P04436 FSCN1P1-201ENST00000568912 1481 ntBASIC17.8■□□□□ 0.44
P04436 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04436 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
P04436 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P04436 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04436 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
P04436 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04436 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.79■□□□□ 0.44
P04436 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.79■□□□□ 0.44
P04436 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.79■□□□□ 0.44
P04436 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.79■□□□□ 0.44
P04436 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.79■□□□□ 0.44
P04436 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
P04436 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.79■□□□□ 0.44
P04436 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.79■□□□□ 0.44
P04436 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.79■□□□□ 0.44
P04436 AC116562.2-201ENST00000507042 360 ntBASIC17.79■□□□□ 0.44
P04436 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.79■□□□□ 0.44
P04436 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.79■□□□□ 0.44
P04436 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
P04436 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
P04436 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
P04436 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04436 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.78■□□□□ 0.44
P04436 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
P04436 AC004980.1-204ENST00000429707 299 ntBASIC17.78■□□□□ 0.44
P04436 TSPY15P-201ENST00000457163 923 ntBASIC17.78■□□□□ 0.44
P04436 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.78■□□□□ 0.44
P04436 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.78■□□□□ 0.44
P04436 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.78■□□□□ 0.44
P04436 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
P04436 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
P04436 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04436 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
P04436 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04436 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04436 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
P04436 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04436 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04436 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.77■□□□□ 0.44
P04436 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.77■□□□□ 0.44
P04436 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
P04436 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
P04436 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04436 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
P04436 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04436 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
P04436 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
P04436 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.77■□□□□ 0.44
P04436 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
P04436 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.77■□□□□ 0.44
P04436 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.77■□□□□ 0.44
P04436 RBM17P1-201ENST00000453646 1190 ntBASIC17.77■□□□□ 0.44
P04436 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.77■□□□□ 0.44
P04436 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.77■□□□□ 0.44
P04436 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.77■□□□□ 0.44
P04436 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.77■□□□□ 0.44
P04436 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.77■□□□□ 0.44
P04436 MIR6786-201ENST00000616843 113 ntBASIC17.77■□□□□ 0.44
P04436 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.77■□□□□ 0.44
P04436 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.77■□□□□ 0.44
P04436 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
P04436 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
P04436 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P04436 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P04436 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
P04436 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P04436 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P04436 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 314.8 ms