Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL4A1P02462 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL4A1P02462 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.89■■□□□ 1.42
COL4A1P02462 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.89■■□□□ 1.42
COL4A1P02462 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.89■■□□□ 1.42
COL4A1P02462 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
COL4A1P02462 AC116562.4-202ENST00000641738 218 ntBASIC23.89■■□□□ 1.42
COL4A1P02462 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.89■■□□□ 1.42
COL4A1P02462 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
COL4A1P02462 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL4A1P02462 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL4A1P02462 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.89■■□□□ 1.42
COL4A1P02462 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.89■■□□□ 1.41
COL4A1P02462 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL4A1P02462 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
COL4A1P02462 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL4A1P02462 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.89■■□□□ 1.41
COL4A1P02462 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.89■■□□□ 1.41
COL4A1P02462 GABARAPL3-202ENST00000624044 1851 ntBASIC23.89■■□□□ 1.41
COL4A1P02462 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.41
COL4A1P02462 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL4A1P02462 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
COL4A1P02462 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL4A1P02462 CCR12P-201ENST00000446203 998 ntBASIC23.89■■□□□ 1.41
COL4A1P02462 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.89■■□□□ 1.41
COL4A1P02462 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.89■■□□□ 1.41
COL4A1P02462 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL4A1P02462 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
COL4A1P02462 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL4A1P02462 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL4A1P02462 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
COL4A1P02462 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL4A1P02462 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.88■■□□□ 1.41
COL4A1P02462 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.88■■□□□ 1.41
COL4A1P02462 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.88■■□□□ 1.41
COL4A1P02462 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
COL4A1P02462 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.88■■□□□ 1.41
COL4A1P02462 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.88■■□□□ 1.41
COL4A1P02462 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
COL4A1P02462 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.88■■□□□ 1.41
COL4A1P02462 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
COL4A1P02462 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.88■■□□□ 1.41
COL4A1P02462 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL4A1P02462 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL4A1P02462 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL4A1P02462 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.88■■□□□ 1.41
COL4A1P02462 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL4A1P02462 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL4A1P02462 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL4A1P02462 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL4A1P02462 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
COL4A1P02462 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.87■■□□□ 1.41
COL4A1P02462 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.87■■□□□ 1.41
COL4A1P02462 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.87■■□□□ 1.41
COL4A1P02462 AL353719.1-201ENST00000566847 864 ntBASIC23.87■■□□□ 1.41
COL4A1P02462 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.87■■□□□ 1.41
COL4A1P02462 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL4A1P02462 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL4A1P02462 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.87■■□□□ 1.41
COL4A1P02462 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.87■■□□□ 1.41
COL4A1P02462 KRT8P45-201ENST00000414328 1447 ntBASIC23.86■■□□□ 1.41
COL4A1P02462 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
COL4A1P02462 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
COL4A1P02462 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
COL4A1P02462 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.86■■□□□ 1.41
COL4A1P02462 COPS8-203ENST00000409334 794 ntTSL 5 BASIC23.86■■□□□ 1.41
COL4A1P02462 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.86■■□□□ 1.41
COL4A1P02462 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 MIR4674-201ENST00000582457 87 ntBASIC23.86■■□□□ 1.41
COL4A1P02462 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 AC009237.14-201ENST00000609975 1594 ntBASIC23.86■■□□□ 1.41
COL4A1P02462 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.86■■□□□ 1.41
COL4A1P02462 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.86■■□□□ 1.41
COL4A1P02462 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A1P02462 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COL4A1P02462 AC011558.1-201ENST00000623459 338 ntBASIC23.86■■□□□ 1.41
COL4A1P02462 TCF3P1-201ENST00000423021 1937 ntBASIC23.85■■□□□ 1.41
COL4A1P02462 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL4A1P02462 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.85■■□□□ 1.41
COL4A1P02462 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
COL4A1P02462 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.85■■□□□ 1.41
COL4A1P02462 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.85■■□□□ 1.41
COL4A1P02462 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.85■■□□□ 1.41
COL4A1P02462 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC23.85■■□□□ 1.41
COL4A1P02462 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
COL4A1P02462 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
COL4A1P02462 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL4A1P02462 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.85■■□□□ 1.41
COL4A1P02462 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms