Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.27■■□□□ 1.16
ALDH1A1P00352 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ALDH1A1P00352 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ALDH1A1P00352 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ALDH1A1P00352 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ALDH1A1P00352 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ALDH1A1P00352 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
ALDH1A1P00352 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.27■■□□□ 1.16
ALDH1A1P00352 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ALDH1A1P00352 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC22.27■■□□□ 1.16
ALDH1A1P00352 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
ALDH1A1P00352 IFNL4P1-201ENST00000607083 540 ntBASIC22.27■■□□□ 1.16
ALDH1A1P00352 BX119927.1-201ENST00000636596 1552 ntBASIC22.27■■□□□ 1.16
ALDH1A1P00352 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
ALDH1A1P00352 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ALDH1A1P00352 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
ALDH1A1P00352 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A1P00352 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A1P00352 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A1P00352 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 AL024507.2-201ENST00000606070 2574 ntBASIC22.26■■□□□ 1.15
ALDH1A1P00352 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 RASA4DP-201ENST00000460726 1199 ntBASIC22.26■■□□□ 1.15
ALDH1A1P00352 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.26■■□□□ 1.15
ALDH1A1P00352 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A1P00352 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
ALDH1A1P00352 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A1P00352 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ALDH1A1P00352 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A1P00352 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A1P00352 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A1P00352 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A1P00352 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 AC009078.2-202ENST00000463353 338 ntBASIC22.25■■□□□ 1.15
ALDH1A1P00352 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 AL160237.2-201ENST00000556165 472 ntBASIC22.25■■□□□ 1.15
ALDH1A1P00352 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A1P00352 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A1P00352 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A1P00352 ECEL1P1-201ENST00000373592 1742 ntBASIC22.25■■□□□ 1.15
ALDH1A1P00352 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A1P00352 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A1P00352 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A1P00352 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ALDH1A1P00352 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.25■■□□□ 1.15
ALDH1A1P00352 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A1P00352 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ALDH1A1P00352 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.24■■□□□ 1.15
ALDH1A1P00352 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.24■■□□□ 1.15
ALDH1A1P00352 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
ALDH1A1P00352 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A1P00352 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.24■■□□□ 1.15
ALDH1A1P00352 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.24■■□□□ 1.15
ALDH1A1P00352 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.24■■□□□ 1.15
ALDH1A1P00352 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC22.24■■□□□ 1.15
ALDH1A1P00352 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A1P00352 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A1P00352 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
ALDH1A1P00352 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A1P00352 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.24■■□□□ 1.15
ALDH1A1P00352 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ALDH1A1P00352 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.23■■□□□ 1.15
ALDH1A1P00352 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.23■■□□□ 1.15
ALDH1A1P00352 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC22.23■■□□□ 1.15
ALDH1A1P00352 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC22.23■■□□□ 1.15
ALDH1A1P00352 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
ALDH1A1P00352 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
ALDH1A1P00352 LINC01711-201ENST00000598340 967 ntBASIC22.23■■□□□ 1.15
ALDH1A1P00352 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.23■■□□□ 1.15
ALDH1A1P00352 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ALDH1A1P00352 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms