Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 AC239809.2-201ENST00000415381 517 ntBASIC18.13■□□□□ 0.49
TRIM3O75382 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM3O75382 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.13■□□□□ 0.49
TRIM3O75382 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM3O75382 PRKY-204ENST00000533551 1019 ntBASIC18.13■□□□□ 0.49
TRIM3O75382 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM3O75382 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM3O75382 AP006294.2-201ENST00000641667 209 ntBASIC18.13■□□□□ 0.49
TRIM3O75382 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM3O75382 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 KRT16P6-202ENST00000425692 1426 ntBASIC18.13■□□□□ 0.49
TRIM3O75382 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM3O75382 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM3O75382 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM3O75382 AC098818.2-201ENST00000564925 2320 ntBASIC18.12■□□□□ 0.49
TRIM3O75382 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM3O75382 AC099778.1-201ENST00000568593 1911 ntBASIC18.12■□□□□ 0.49
TRIM3O75382 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM3O75382 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM3O75382 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM3O75382 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM3O75382 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIM3O75382 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM3O75382 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIM3O75382 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRIM3O75382 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM3O75382 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM3O75382 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM3O75382 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM3O75382 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM3O75382 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TRIM3O75382 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM3O75382 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRIM3O75382 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM3O75382 AC026471.1-201ENST00000564629 3026 ntBASIC18.11■□□□□ 0.49
TRIM3O75382 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 KRASP1-201ENST00000407852 552 ntBASIC18.11■□□□□ 0.49
TRIM3O75382 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM3O75382 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM3O75382 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM3O75382 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRIM3O75382 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
TRIM3O75382 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM3O75382 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM3O75382 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM3O75382 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
TRIM3O75382 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRIM3O75382 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM3O75382 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM3O75382 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRIM3O75382 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM3O75382 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM3O75382 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM3O75382 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM3O75382 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM3O75382 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM3O75382 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM3O75382 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM3O75382 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM3O75382 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM3O75382 AC093827.2-201ENST00000512654 315 ntBASIC18.1■□□□□ 0.49
TRIM3O75382 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM3O75382 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.1■□□□□ 0.49
TRIM3O75382 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM3O75382 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms