Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC26.98■■□□□ 1.91
BRD4O60885 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
BRD4O60885 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
BRD4O60885 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC26.97■■□□□ 1.91
BRD4O60885 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
BRD4O60885 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC26.97■■□□□ 1.91
BRD4O60885 CLN6-221ENST00000637494 765 ntTSL 5 BASIC26.97■■□□□ 1.91
BRD4O60885 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
BRD4O60885 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
BRD4O60885 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
BRD4O60885 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
BRD4O60885 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC26.97■■□□□ 1.91
BRD4O60885 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
BRD4O60885 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
BRD4O60885 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
BRD4O60885 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
BRD4O60885 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
BRD4O60885 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
BRD4O60885 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
BRD4O60885 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC26.97■■□□□ 1.91
BRD4O60885 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC26.97■■□□□ 1.91
BRD4O60885 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 PCDHAC2-203ENST00000615316 3011 ntBASIC26.96■■□□□ 1.91
BRD4O60885 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
BRD4O60885 TMEM179-206ENST00000616017 1645 ntBASIC26.96■■□□□ 1.91
BRD4O60885 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC26.96■■□□□ 1.91
BRD4O60885 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 AC125437.2-201ENST00000625180 2167 ntBASIC26.96■■□□□ 1.91
BRD4O60885 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC26.96■■□□□ 1.91
BRD4O60885 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
BRD4O60885 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 TUBB8P6-201ENST00000436895 1288 ntBASIC26.96■■□□□ 1.91
BRD4O60885 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC26.96■■□□□ 1.91
BRD4O60885 RNF146-204ENST00000476956 884 ntTSL 2 BASIC26.96■■□□□ 1.91
BRD4O60885 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC26.96■■□□□ 1.91
BRD4O60885 DUX4L26-201ENST00000489078 1255 ntBASIC26.96■■□□□ 1.91
BRD4O60885 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC26.96■■□□□ 1.91
BRD4O60885 CFL2-205ENST00000555765 632 ntTSL 2 BASIC26.96■■□□□ 1.91
BRD4O60885 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC26.96■■□□□ 1.91
BRD4O60885 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC26.96■■□□□ 1.91
BRD4O60885 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
BRD4O60885 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
BRD4O60885 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC26.95■■□□□ 1.9
BRD4O60885 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC26.95■■□□□ 1.9
BRD4O60885 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
BRD4O60885 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
BRD4O60885 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC26.95■■□□□ 1.9
BRD4O60885 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC26.95■■□□□ 1.9
BRD4O60885 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
BRD4O60885 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
BRD4O60885 PRR31-201ENST00000371629 978 ntTSL 2 BASIC26.95■■□□□ 1.9
BRD4O60885 AC011506.1-201ENST00000474329 610 ntBASIC26.95■■□□□ 1.9
BRD4O60885 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC26.95■■□□□ 1.9
BRD4O60885 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC26.95■■□□□ 1.9
BRD4O60885 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC26.95■■□□□ 1.9
BRD4O60885 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC26.95■■□□□ 1.9
BRD4O60885 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
BRD4O60885 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
BRD4O60885 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
BRD4O60885 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
BRD4O60885 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
BRD4O60885 LGALS8-AS1-201ENST00000487567 1457 ntBASIC26.94■■□□□ 1.9
BRD4O60885 AC018553.1-201ENST00000616682 1458 ntBASIC26.94■■□□□ 1.9
BRD4O60885 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
BRD4O60885 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
BRD4O60885 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC26.94■■□□□ 1.9
BRD4O60885 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
BRD4O60885 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
BRD4O60885 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC26.94■■□□□ 1.9
BRD4O60885 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
BRD4O60885 AC131212.4-201ENST00000623606 975 ntBASIC26.94■■□□□ 1.9
BRD4O60885 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
BRD4O60885 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
BRD4O60885 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
BRD4O60885 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC26.93■■□□□ 1.9
BRD4O60885 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
BRD4O60885 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
BRD4O60885 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
BRD4O60885 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
BRD4O60885 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC26.93■■□□□ 1.9
BRD4O60885 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
BRD4O60885 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
BRD4O60885 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC26.93■■□□□ 1.9
BRD4O60885 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
BRD4O60885 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
BRD4O60885 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC26.93■■□□□ 1.9
BRD4O60885 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC26.93■■□□□ 1.9
BRD4O60885 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
BRD4O60885 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
BRD4O60885 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
BRD4O60885 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
BRD4O60885 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms