Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCRIPO60506 KRT18P16-201ENST00000510337 1294 ntBASIC19.89■□□□□ 0.77
SYNCRIPO60506 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.89■□□□□ 0.77
SYNCRIPO60506 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
SYNCRIPO60506 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCRIPO60506 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.89■□□□□ 0.77
SYNCRIPO60506 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.89■□□□□ 0.77
SYNCRIPO60506 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCRIPO60506 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.89■□□□□ 0.77
SYNCRIPO60506 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCRIPO60506 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SYNCRIPO60506 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
SYNCRIPO60506 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCRIPO60506 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SYNCRIPO60506 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SYNCRIPO60506 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCRIPO60506 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCRIPO60506 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.88■□□□□ 0.77
SYNCRIPO60506 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCRIPO60506 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.88■□□□□ 0.77
SYNCRIPO60506 AC007952.6-201ENST00000573168 2673 ntBASIC19.88■□□□□ 0.77
SYNCRIPO60506 AC003957.1-201ENST00000625108 2673 ntBASIC19.88■□□□□ 0.77
SYNCRIPO60506 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNCRIPO60506 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.88■□□□□ 0.77
SYNCRIPO60506 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.88■□□□□ 0.77
SYNCRIPO60506 NAPSB-206ENST00000562112 1266 ntBASIC19.88■□□□□ 0.77
SYNCRIPO60506 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.88■□□□□ 0.77
SYNCRIPO60506 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCRIPO60506 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.88■□□□□ 0.77
SYNCRIPO60506 MIR6786-201ENST00000616843 113 ntBASIC19.88■□□□□ 0.77
SYNCRIPO60506 AL445675.2-201ENST00000620291 557 ntBASIC19.88■□□□□ 0.77
SYNCRIPO60506 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCRIPO60506 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCRIPO60506 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SYNCRIPO60506 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNCRIPO60506 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SYNCRIPO60506 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNCRIPO60506 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SYNCRIPO60506 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SYNCRIPO60506 PCDHAC2-203ENST00000615316 3011 ntBASIC19.87■□□□□ 0.77
SYNCRIPO60506 FSCN1P1-201ENST00000568912 1481 ntBASIC19.87■□□□□ 0.77
SYNCRIPO60506 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNCRIPO60506 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNCRIPO60506 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNCRIPO60506 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNCRIPO60506 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNCRIPO60506 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SYNCRIPO60506 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNCRIPO60506 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SYNCRIPO60506 RCN1P1-201ENST00000400413 996 ntBASIC19.87■□□□□ 0.77
SYNCRIPO60506 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.87■□□□□ 0.77
SYNCRIPO60506 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNCRIPO60506 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNCRIPO60506 AC026271.3-201ENST00000571884 352 ntBASIC19.87■□□□□ 0.77
SYNCRIPO60506 AC145285.6-201ENST00000604632 637 ntBASIC19.87■□□□□ 0.77
SYNCRIPO60506 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.87■□□□□ 0.77
SYNCRIPO60506 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.87■□□□□ 0.77
SYNCRIPO60506 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNCRIPO60506 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SYNCRIPO60506 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SYNCRIPO60506 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.87■□□□□ 0.77
SYNCRIPO60506 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.86■□□□□ 0.77
SYNCRIPO60506 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.86■□□□□ 0.77
SYNCRIPO60506 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.86■□□□□ 0.77
SYNCRIPO60506 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 FITM1-202ENST00000559294 800 ntBASIC19.86■□□□□ 0.77
SYNCRIPO60506 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 AC005363.2-201ENST00000618631 242 ntBASIC19.86■□□□□ 0.77
SYNCRIPO60506 AC131212.4-201ENST00000623606 975 ntBASIC19.86■□□□□ 0.77
SYNCRIPO60506 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.86■□□□□ 0.77
SYNCRIPO60506 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.86■□□□□ 0.77
SYNCRIPO60506 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.86■□□□□ 0.77
SYNCRIPO60506 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.86■□□□□ 0.77
SYNCRIPO60506 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.86■□□□□ 0.77
SYNCRIPO60506 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SYNCRIPO60506 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SYNCRIPO60506 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNCRIPO60506 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNCRIPO60506 LINC01568-207ENST00000641790 1380 ntBASIC19.85■□□□□ 0.77
SYNCRIPO60506 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNCRIPO60506 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNCRIPO60506 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNCRIPO60506 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNCRIPO60506 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SYNCRIPO60506 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SYNCRIPO60506 AL390955.1-201ENST00000428694 934 ntBASIC19.85■□□□□ 0.77
SYNCRIPO60506 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.85■□□□□ 0.77
SYNCRIPO60506 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SYNCRIPO60506 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms