Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SLC28A2O43868 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC28A2O43868 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.73■□□□□ 0.59
SLC28A2O43868 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC28A2O43868 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SLC28A2O43868 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC28A2O43868 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC28A2O43868 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC28A2O43868 BX119927.1-201ENST00000636596 1552 ntBASIC18.73■□□□□ 0.59
SLC28A2O43868 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
SLC28A2O43868 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
SLC28A2O43868 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SLC28A2O43868 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SLC28A2O43868 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC28A2O43868 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC28A2O43868 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC28A2O43868 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.73■□□□□ 0.59
SLC28A2O43868 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC28A2O43868 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC28A2O43868 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
SLC28A2O43868 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SLC28A2O43868 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC28A2O43868 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
SLC28A2O43868 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A2O43868 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SLC28A2O43868 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC28A2O43868 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.72■□□□□ 0.59
SLC28A2O43868 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC28A2O43868 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.72■□□□□ 0.59
SLC28A2O43868 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC28A2O43868 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC28A2O43868 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SLC28A2O43868 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC28A2O43868 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC28A2O43868 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SLC28A2O43868 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC28A2O43868 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 AL691432.2-201ENST00000607222 2038 ntBASIC18.71■□□□□ 0.59
SLC28A2O43868 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SLC28A2O43868 AC113347.1-201ENST00000413321 391 ntBASIC18.71■□□□□ 0.59
SLC28A2O43868 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC28A2O43868 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC28A2O43868 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC28A2O43868 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC28A2O43868 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SLC28A2O43868 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC28A2O43868 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC28A2O43868 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC28A2O43868 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC28A2O43868 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC28A2O43868 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.71■□□□□ 0.58
SLC28A2O43868 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC28A2O43868 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC28A2O43868 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC28A2O43868 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC28A2O43868 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC28A2O43868 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC28A2O43868 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
SLC28A2O43868 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC28A2O43868 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC28A2O43868 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC28A2O43868 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC28A2O43868 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms