Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC1O00299 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC1O00299 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC1O00299 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC1O00299 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLIC1O00299 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
CLIC1O00299 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC1O00299 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.34■□□□□ 0.53
CLIC1O00299 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC1O00299 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC1O00299 AF201337.1-201ENST00000520239 748 ntBASIC18.34■□□□□ 0.53
CLIC1O00299 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC1O00299 AC105036.2-201ENST00000569468 176 ntBASIC18.34■□□□□ 0.53
CLIC1O00299 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.34■□□□□ 0.53
CLIC1O00299 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.34■□□□□ 0.53
CLIC1O00299 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC1O00299 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIC1O00299 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIC1O00299 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC1O00299 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC1O00299 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC1O00299 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CLIC1O00299 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.33■□□□□ 0.53
CLIC1O00299 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIC1O00299 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
CLIC1O00299 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CLIC1O00299 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CLIC1O00299 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC1O00299 BX276092.2-201ENST00000417668 665 ntBASIC18.33■□□□□ 0.52
CLIC1O00299 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.33■□□□□ 0.52
CLIC1O00299 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.33■□□□□ 0.52
CLIC1O00299 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.33■□□□□ 0.52
CLIC1O00299 AC080038.1-201ENST00000611274 1154 ntBASIC18.33■□□□□ 0.52
CLIC1O00299 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC1O00299 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.33■□□□□ 0.52
CLIC1O00299 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC1O00299 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.33■□□□□ 0.52
CLIC1O00299 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.33■□□□□ 0.52
CLIC1O00299 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC1O00299 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC1O00299 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CLIC1O00299 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIC1O00299 AC141586.3-201ENST00000562166 1838 ntBASIC18.33■□□□□ 0.52
CLIC1O00299 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CLIC1O00299 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC1O00299 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC1O00299 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.32■□□□□ 0.52
CLIC1O00299 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLIC1O00299 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CLIC1O00299 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC1O00299 TEX21P-204ENST00000641479 1693 ntBASIC18.32■□□□□ 0.52
CLIC1O00299 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC1O00299 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.32■□□□□ 0.52
CLIC1O00299 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.32■□□□□ 0.52
CLIC1O00299 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.32■□□□□ 0.52
CLIC1O00299 AC073210.2-201ENST00000430369 194 ntBASIC18.32■□□□□ 0.52
CLIC1O00299 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.32■□□□□ 0.52
CLIC1O00299 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.32■□□□□ 0.52
CLIC1O00299 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.32■□□□□ 0.52
CLIC1O00299 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.32■□□□□ 0.52
CLIC1O00299 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC1O00299 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.32■□□□□ 0.52
CLIC1O00299 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC1O00299 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC1O00299 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC1O00299 ZNF815P-204ENST00000434898 1737 ntBASIC18.32■□□□□ 0.52
CLIC1O00299 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC1O00299 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIC1O00299 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC1O00299 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC1O00299 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC1O00299 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC1O00299 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.31■□□□□ 0.52
CLIC1O00299 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CLIC1O00299 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 AC005829.2-201ENST00000571422 1056 ntBASIC18.31■□□□□ 0.52
CLIC1O00299 AL050303.2-201ENST00000619798 666 ntBASIC18.31■□□□□ 0.52
CLIC1O00299 AC073111.5-205ENST00000641717 521 ntBASIC18.31■□□□□ 0.52
CLIC1O00299 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLIC1O00299 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLIC1O00299 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.31■□□□□ 0.52
CLIC1O00299 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms