Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LINC01549A6NIU2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 AC105265.2-201ENST00000467189 838 ntBASIC13.84□□□□□ -0.19
LINC01549A6NIU2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 NOC2LP1-202ENST00000452600 2235 ntBASIC13.84□□□□□ -0.19
LINC01549A6NIU2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 AL133373.2-201ENST00000623187 2828 ntBASIC13.84□□□□□ -0.19
LINC01549A6NIU2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01549A6NIU2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01549A6NIU2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01549A6NIU2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01549A6NIU2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.83□□□□□ -0.19
LINC01549A6NIU2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.83□□□□□ -0.19
LINC01549A6NIU2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01549A6NIU2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01549A6NIU2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01549A6NIU2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01549A6NIU2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC01549A6NIU2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms