Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC011453.2-201ENST00000603737 729 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 OR7A19P-201ENST00000608051 733 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DRB4X5D2U9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
HLA-DRB4X5D2U9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AL442639.1-201ENST00000625030 1899 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 SDAD1P1-202ENST00000524156 2051 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 A2MP1-204ENST00000566278 4130 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 SNORA74A-201ENST00000364089 198 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 RHOT1P2-201ENST00000366423 333 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 ARL4AP5-201ENST00000404372 599 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 RNA5SP113-201ENST00000410486 84 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 PSMD10P3-201ENST00000437000 448 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 RPL23AP2-201ENST00000471227 466 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 RN7SL809P-201ENST00000482040 297 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 SCARNA22-201ENST00000503991 125 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AC091868.1-201ENST00000508746 304 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AL512782.1-201ENST00000603093 364 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AL121873.1-201ENST00000616013 524 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AC090510.2-201ENST00000617465 629 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AC015804.1-201ENST00000622935 435 ntBASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DRB4X5D2U9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC018529.3-201ENST00000624212 2254 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC012020.1-201ENST00000624541 1728 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 RNU1-82P-201ENST00000390851 165 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AL590762.2-201ENST00000395798 571 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AL080315.1-201ENST00000406055 466 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 GSTM3P2-201ENST00000412746 530 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AL591848.1-201ENST00000413092 322 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 BX510359.2-201ENST00000417920 305 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC092570.3-201ENST00000420113 693 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AL645608.4-201ENST00000423619 154 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC106901.1-201ENST00000425086 698 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 NRBF2P3-201ENST00000432731 865 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 RPL31P44-201ENST00000447680 377 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 PSMC1P13-201ENST00000458195 985 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC063943.1-201ENST00000465434 453 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 PPM1AP1-201ENST00000502740 1135 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC100770.1-201ENST00000532310 322 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 FKBP1BP1-201ENST00000553366 325 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 MIR3934-201ENST00000579806 107 ntBASIC3.51□□□□□ -1.85
HLA-DRB4X5D2U9 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms