Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
YIPF1Q9Y548 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
YIPF1Q9Y548 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
YIPF1Q9Y548 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 SMG1P6-201ENST00000532337 2930 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC007382.1-201ENST00000624376 2618 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC125336.1-201ENST00000508893 2827 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AL049697.2-201ENST00000403708 294 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 MTCYBP7-201ENST00000419540 1134 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 RPS17P8-201ENST00000434525 335 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 CYCSP42-201ENST00000450823 238 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 SEPT7P3-201ENST00000455017 621 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC093166.2-201ENST00000455969 1017 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 RN7SL517P-201ENST00000462240 305 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 NDUFA5P9-201ENST00000472609 340 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 LARP7P4-201ENST00000481075 878 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 RN7SL558P-201ENST00000497468 299 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 Y_RNA.719-201ENST00000517156 106 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 OSBPL9P3-201ENST00000534523 595 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC093014.1-201ENST00000548926 724 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC008126.1-201ENST00000549019 480 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 MIR1264-201ENST00000616374 69 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC012414.7-202ENST00000622705 1090 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 TLK1P1-201ENST00000456760 2440 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 AC009643.2-201ENST00000603543 1448 ntBASIC5.05□□□□□ -1.6
YIPF1Q9Y548 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YIPF1Q9Y548 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC068870.3-201ENST00000625077 2536 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 OR4K15-201ENST00000305051 1216 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC126755.2-208ENST00000327792 462 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC138969.1-213ENST00000331436 462 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 SNORA70F-201ENST00000384142 135 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 RNU1-82P-201ENST00000390851 165 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AL355143.1-201ENST00000407101 841 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC079809.1-201ENST00000415468 276 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 ATG4AP1-201ENST00000416893 538 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 MTND2P9-201ENST00000422293 931 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC009480.2-201ENST00000422916 432 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 C4BPAP2-201ENST00000428434 478 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 CNOT7P1-201ENST00000429006 852 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC092162.1-201ENST00000432828 434 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC239798.3-201ENST00000454459 408 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 snoU13.1-201ENST00000459157 104 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC098583.1-201ENST00000480875 255 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AL049874.2-201ENST00000492636 288 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC073358.1-201ENST00000505671 684 ntBASIC5.04□□□□□ -1.6
YIPF1Q9Y548 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
YIPF1Q9Y548 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms