Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 AP001922.4-201ENST00000526967 290 ntBASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 AC008126.1-201ENST00000549019 480 ntBASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 NMNAT1P5-201ENST00000559657 841 ntBASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 SUMO2P14-201ENST00000604488 293 ntBASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 Mico1.1-201ENST00000611698 204 ntBASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 MIR6133-201ENST00000617057 108 ntBASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 AC074140.1-201ENST00000621617 208 ntBASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 AC011330.2-201ENST00000621680 635 ntBASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
SSX2IPQ9Y2D8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC245100.2-201ENST00000454544 1679 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 CASC19-281ENST00000642118 1554 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC103591.2-201ENST00000265259 766 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 RNU6-906P-201ENST00000384700 70 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 UBE2V1P11-201ENST00000411559 285 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 XKRYP4-201ENST00000414395 483 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 MTND5P25-201ENST00000430499 799 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC006466.1-201ENST00000438721 289 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC073648.4-201ENST00000442655 781 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC092647.3-201ENST00000443044 633 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 Z83846.1-201ENST00000446798 265 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 XKRYP5-201ENST00000449659 483 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 CYCSP42-201ENST00000450823 238 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC092155.2-201ENST00000454675 477 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC092754.1-201ENST00000472975 479 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC069304.1-201ENST00000491593 704 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 GTF2F2P1-201ENST00000511083 675 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 RNU6-513P-201ENST00000516104 104 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 YWHABP2-201ENST00000540201 713 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 OR4U1P-201ENST00000554958 912 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC104785.1-201ENST00000603220 588 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC005252.1-201ENST00000604518 1063 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AL162574.1-201ENST00000615702 950 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC022079.2-201ENST00000619739 566 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC022079.1-201ENST00000621546 602 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC105105.5-201ENST00000622635 1294 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC015660.5-201ENST00000623238 564 ntBASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX2IPQ9Y2D8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms