Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.77□□□□□ -1.33
SALL4Q9UJQ4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.77□□□□□ -1.33
SALL4Q9UJQ4 MT-RNR2-201ENST00000387347 1559 ntBASIC6.77□□□□□ -1.33
SALL4Q9UJQ4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SALL4Q9UJQ4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SALL4Q9UJQ4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SALL4Q9UJQ4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SALL4Q9UJQ4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AL022578.1-201ENST00000439330 1433 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 SNORD35A-201ENST00000363389 86 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 RNA5SP478-201ENST00000364657 115 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AL391419.1-201ENST00000398901 1275 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 HMGB1P11-201ENST00000413899 637 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AL513175.1-201ENST00000431492 780 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AC019084.1-201ENST00000457337 432 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AC048346.1-201ENST00000510247 144 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 MTCO1P30-201ENST00000515244 580 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 RNA5SP116-201ENST00000516132 98 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 MTCO2P4-201ENST00000517968 247 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 OR5D2P-201ENST00000524390 911 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 RPL3P13-201ENST00000550415 216 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AC007494.1-201ENST00000562293 760 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 MIR212-201ENST00000586026 110 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AC008250.2-201ENST00000615261 205 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 CRYM-AS1-204ENST00000637983 556 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 AL034370.1-201ENST00000397254 1590 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 CCT8P1-201ENST00000413611 1657 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.76□□□□□ -1.33
SALL4Q9UJQ4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 AC217777.1-201ENST00000570034 1471 ntBASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 Y_RNA.535-201ENST00000384612 99 ntBASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 FDPSP5-201ENST00000399474 1057 ntBASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 AL133260.1-201ENST00000405720 405 ntBASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 MIR1303-201ENST00000408625 86 ntBASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 HMGA1P8-201ENST00000414130 321 ntBASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 VDAC1P6-201ENST00000430062 855 ntBASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 BX679664.2-201ENST00000439282 283 ntBASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 RPS4XP4-201ENST00000443195 763 ntBASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.75□□□□□ -1.33
SALL4Q9UJQ4 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms