Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 BTF3P6-201ENST00000448054 499 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AC108463.1-201ENST00000450258 347 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 RNA5SP103-201ENST00000459503 118 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 RN7SL346P-201ENST00000491561 294 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 CEACAMP10-202ENST00000495431 496 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AK3P4-201ENST00000504283 583 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 RFPL4AP5-201ENST00000514977 504 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 RN7SKP92-201ENST00000517266 244 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 FKBP1BP1-201ENST00000553366 325 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AC018552.1-201ENST00000562099 811 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AC233702.9-201ENST00000581528 203 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 BNIP3P7-201ENST00000605641 516 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AC011815.3-201ENST00000624194 473 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 TMEM30CP-203ENST00000637814 1035 ntBASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLCF1Q9UBD9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 SCN1A-220ENST00000641603 12506 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 KARSP3-201ENST00000571212 1504 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AC125257.1-201ENST00000560400 2930 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 MIR129-1-201ENST00000384972 72 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 TMBIM7P-201ENST00000418074 855 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 Z85994.2-201ENST00000434327 452 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 CYCSP42-201ENST00000450823 238 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AP000942.1-201ENST00000463969 747 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 RN7SL860P-201ENST00000473738 223 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 ATG10-AS1-201ENST00000504846 648 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 C1GALT1P3-201ENST00000522049 819 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AC027281.1-201ENST00000574178 758 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 CYCSP40-201ENST00000575927 294 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 SNORD39.2-201ENST00000579995 76 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AL451049.1-201ENST00000608672 497 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AC015922.4-201ENST00000612568 690 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AC004232.3-201ENST00000622977 525 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AC083843.3-201ENST00000623679 2186 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 AL592148.3-201ENST00000608771 2646 ntBASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.18□□□□□ -1.74
CLCF1Q9UBD9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 AC100778.3-201ENST00000580060 1750 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 ZNF137P-201ENST00000456718 1920 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 RNU4-44P-201ENST00000363050 141 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 RNU6-819P-201ENST00000364116 107 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 SNORA71.2-201ENST00000364941 134 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms