Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LINCR-0001-201ENST00000517732 562 ntTSL 4 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 CCND2P1-201ENST00000539268 799 ntBASIC9.04□□□□□ -0.96
RTN4Q9NQC3 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 AC009248.1-201ENST00000548155 735 ntBASIC9.04□□□□□ -0.96
RTN4Q9NQC3 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 AC013283.1-201ENST00000557282 492 ntBASIC9.04□□□□□ -0.96
RTN4Q9NQC3 TP53TG3HP-201ENST00000563487 346 ntBASIC9.04□□□□□ -0.96
RTN4Q9NQC3 FRG2IP-201ENST00000563581 781 ntBASIC9.04□□□□□ -0.96
RTN4Q9NQC3 RN7SL353P-201ENST00000579902 252 ntBASIC9.04□□□□□ -0.96
RTN4Q9NQC3 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 AC010542.5-201ENST00000612427 382 ntBASIC9.04□□□□□ -0.96
RTN4Q9NQC3 CARMN-212ENST00000614896 536 ntTSL 5 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 ATM-228ENST00000639240 498 ntTSL 5 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 ATM-230ENST00000640388 578 ntTSL 5 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 OLMALINC-206ENST00000641799 1195 ntBASIC9.04□□□□□ -0.96
RTN4Q9NQC3 SAMMSON-227ENST00000642114 1199 ntBASIC9.04□□□□□ -0.96
RTN4Q9NQC3 AP003486.1-201ENST00000525716 3994 ntBASIC9.04□□□□□ -0.96
RTN4Q9NQC3 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RTN4Q9NQC3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 INTS4-211ENST00000535943 1382 ntTSL 5 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 KIR2DL4-202ENST00000346587 1026 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 Y_RNA.231-201ENST00000364358 102 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 RNU6-754P-201ENST00000391166 107 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 MIR1302-11-201ENST00000408051 138 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 MIR1302-9-201ENST00000408365 138 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 MIR1302-10-201ENST00000408734 138 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 RN7SKP194-201ENST00000411328 351 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 CRIP1P3-201ENST00000416794 220 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 RALY-AS1-202ENST00000432859 610 ntTSL 3 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 ERLEC1P1-201ENST00000433806 578 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 IGKV1OR-3-201ENST00000446944 348 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC234775.1-201ENST00000454247 670 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC079804.1-201ENST00000461922 436 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC007547.1-201ENST00000462177 490 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 RN7SKP234-201ENST00000517173 224 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC023050.3-201ENST00000541142 333 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC012157.1-201ENST00000549725 501 ntTSL 4 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 CHCHD3P2-201ENST00000550751 639 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 KARS-209ENST00000568378 459 ntTSL 5 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC006254.3-201ENST00000603353 884 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 SRGAP2D-201ENST00000605551 1021 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 MIR1302-2-201ENST00000607096 138 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 Metazoa_SRP.169-201ENST00000613708 283 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 CYP4F35P-202ENST00000636121 390 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 AC020904.2-202ENST00000614660 1401 ntBASIC9.03□□□□□ -0.96
RTN4Q9NQC3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RTN4Q9NQC3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
RTN4Q9NQC3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
RTN4Q9NQC3 AC012254.3-201ENST00000591183 2117 ntBASIC9.02□□□□□ -0.96
RTN4Q9NQC3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
RTN4Q9NQC3 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms