Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 MFSD8-220ENST00000641243 1422 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 SEPT7P7-201ENST00000420492 1301 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 RNA5SP500-201ENST00000364486 119 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 OR1L6-202ENST00000373684 1044 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 SNORD56.6-201ENST00000384569 71 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC093719.1-202ENST00000392735 373 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 RNU2-50P-201ENST00000410494 143 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 RN7SKP29-201ENST00000410957 272 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 RNU2-6P-201ENST00000411404 190 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 PCNPP4-201ENST00000414817 517 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC234782.4-201ENST00000417646 1048 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC027644.1-201ENST00000419595 298 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 ELOCP10-201ENST00000440624 327 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 EEF1A1P39-201ENST00000440791 250 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AL391987.1-201ENST00000441025 200 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC064862.4-201ENST00000442180 334 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 HMGN1P36-201ENST00000446623 298 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AL589880.1-201ENST00000448271 287 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 MTND4LP2-201ENST00000502312 285 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 RNU6-416P-201ENST00000516265 103 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 RN7SKP287-201ENST00000516546 266 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 RN7SKP283-201ENST00000517197 270 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 TMEM97P2-201ENST00000517841 403 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC008562.1-201ENST00000521763 330 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC139103.1-201ENST00000534696 1030 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 MTND4LP24-201ENST00000572277 291 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 CCDC58P3-201ENST00000590792 430 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC009237.13-201ENST00000603193 276 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AL035411.2-201ENST00000604022 421 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 ELOCP34-201ENST00000604436 327 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AP000238.1-201ENST00000608759 426 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC018926.3-201ENST00000618841 406 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 OR13C1P-202ENST00000641378 2919 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 ADAM5-202ENST00000399789 1942 ntBASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.83□□□□□ -1.64
RAB40AQ8WXH6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 AC068870.1-201ENST00000563737 2455 ntBASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 AC073136.1-201ENST00000449426 2884 ntBASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 AC100757.1-201ENST00000616872 1835 ntBASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAB40AQ8WXH6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms