Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 APOOP3-201ENST00000536787 586 ntBASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 AL162632.2-201ENST00000553933 399 ntBASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 AC007255.2-201ENST00000604053 631 ntBASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 MIR6813-201ENST00000621638 56 ntBASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 AL136981.1-203ENST00000451452 3844 ntBASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SCUBE3Q8IX30 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC046144.1-201ENST00000478559 1853 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RNU5E-1-201ENST00000362477 120 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 Y_RNA.301-201ENST00000364990 103 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 Y_RNA.339-201ENST00000365325 102 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 SNORA20.2-201ENST00000383922 131 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AL121972.1-201ENST00000402023 252 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RN7SKP221-201ENST00000410420 301 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RN7SKP247-201ENST00000411094 308 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RPS15AP9-201ENST00000439856 381 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RPSAP7-201ENST00000456871 885 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RPL7P22-201ENST00000466005 733 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RN7SL306P-201ENST00000492941 296 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RPSAP51-201ENST00000497462 645 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 SSX8-201ENST00000506270 579 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RNU6-1334P-201ENST00000516032 105 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RNU6-201P-201ENST00000517100 61 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RNU6-789P-201ENST00000517105 102 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC009812.2-201ENST00000517657 457 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 IGHV3-63-201ENST00000518422 341 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC022616.6-201ENST00000520479 119 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 GLYATL1P4-201ENST00000529326 906 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 UBE2L4-201ENST00000587688 464 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC245389.1-201ENST00000605141 529 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 SNORD91A-202ENST00000609620 191 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AP005329.3-201ENST00000609924 686 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AL161931.1-201ENST00000612768 246 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC010149.2-201ENST00000637608 315 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AC013488.1-201ENST00000526618 1838 ntBASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.54□□□□□ -1.2
SCUBE3Q8IX30 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCUBE3Q8IX30 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.53□□□□□ -1.2
SCUBE3Q8IX30 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCUBE3Q8IX30 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.53□□□□□ -1.2
SCUBE3Q8IX30 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SCUBE3Q8IX30 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCUBE3Q8IX30 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.53□□□□□ -1.2
SCUBE3Q8IX30 UGT2B27P-201ENST00000505092 1620 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms