Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 NCLP2-201ENST00000416078 1462 ntBASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 AL442639.1-201ENST00000625030 1899 ntBASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 AC109780.1-201ENST00000451768 1344 ntBASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 AL133243.3-201ENST00000617415 3004 ntBASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 AL355852.1-201ENST00000454081 1771 ntBASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC50Q8IVM0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC50Q8IVM0 AC068254.2-201ENST00000623938 3577 ntBASIC4.9□□□□□ -1.62
CCDC50Q8IVM0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC50Q8IVM0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.9□□□□□ -1.62
CCDC50Q8IVM0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
CCDC50Q8IVM0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CCDC50Q8IVM0 AC015813.6-201ENST00000624409 5808 ntBASIC4.9□□□□□ -1.62
CCDC50Q8IVM0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 RNA5SP52-201ENST00000362448 134 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 RNA5SP305-201ENST00000362665 119 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 GSTM3P2-201ENST00000412746 530 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 RAB9AP4-201ENST00000415230 609 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AL353748.1-201ENST00000440753 474 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 RBMY2TP-201ENST00000451162 947 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AURKAPS2-201ENST00000454983 333 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 RPL23AP2-201ENST00000471227 466 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC074386.1-201ENST00000476560 767 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 RN7SL214P-201ENST00000487317 265 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC108022.1-201ENST00000493466 478 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 GAPDHP56-201ENST00000506031 988 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC018442.3-201ENST00000523025 183 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC025857.1-201ENST00000525252 377 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC084033.1-201ENST00000550830 633 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC015912.2-201ENST00000571053 181 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC087763.1-201ENST00000603391 286 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC096553.1-201ENST00000605169 829 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 AC074276.2-201ENST00000619891 348 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 RMST_9.1-201ENST00000619945 193 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 MAPK10-263ENST00000641052 4307 ntBASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC50Q8IVM0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 RN7SKP115-201ENST00000363177 317 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 RNA5SP507-201ENST00000363603 121 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 RHOT1P2-201ENST00000366423 333 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AL591848.1-201ENST00000413092 322 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 GLUD1P9-201ENST00000420997 1173 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 Z74021.1-201ENST00000423610 407 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AL645608.4-201ENST00000423619 154 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 SKP1P3-201ENST00000429280 487 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 BX119904.1-201ENST00000432026 348 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 MTND4LP12-201ENST00000448237 295 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 MTND6P32-201ENST00000457611 483 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 PSMC1P13-201ENST00000458195 985 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC090142.1-201ENST00000465776 462 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC012158.1-204ENST00000483430 465 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 AC025164.1-201ENST00000496249 478 ntBASIC4.89□□□□□ -1.63
CCDC50Q8IVM0 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms