Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC141Q6ZP82 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC141Q6ZP82 SNORA84-201ENST00000459229 133 ntBASIC6.59□□□□□ -1.36
CCDC141Q6ZP82 RNA5SP249-201ENST00000516127 99 ntBASIC6.59□□□□□ -1.36
CCDC141Q6ZP82 RNA5SP519-201ENST00000516480 119 ntBASIC6.59□□□□□ -1.36
CCDC141Q6ZP82 AL359219.2-201ENST00000555184 348 ntBASIC6.59□□□□□ -1.36
CCDC141Q6ZP82 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.59□□□□□ -1.36
CCDC141Q6ZP82 AC010201.1-201ENST00000605051 540 ntBASIC6.59□□□□□ -1.36
CCDC141Q6ZP82 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.59□□□□□ -1.36
CCDC141Q6ZP82 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.59□□□□□ -1.36
CCDC141Q6ZP82 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC141Q6ZP82 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 RNA5SP283-201ENST00000365604 119 ntBASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 YY1P1-201ENST00000427625 668 ntBASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 RRM2P4-201ENST00000441721 562 ntBASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 AC006326.1-201ENST00000445465 787 ntBASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 PGBD4P4-201ENST00000509673 613 ntBASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 AP002360.3-201ENST00000607673 710 ntBASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC141Q6ZP82 IQCB2P-201ENST00000401788 1633 ntBASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AL359837.1-201ENST00000381357 287 ntBASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 RN7SKP235-201ENST00000410662 305 ntBASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AC009237.10-201ENST00000414112 510 ntBASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 BMS1P19-201ENST00000433925 393 ntBASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AL356276.2-201ENST00000435919 558 ntBASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AC010374.1-201ENST00000503762 1237 ntBASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 PARP4P3-201ENST00000510265 317 ntBASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AC138832.1-201ENST00000522871 556 ntBASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AC091178.1-203ENST00000584586 279 ntBASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AC027228.2-201ENST00000567141 2154 ntBASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.57□□□□□ -1.36
CCDC141Q6ZP82 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 MIR23B-201ENST00000384832 97 ntBASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 Z95327.1-201ENST00000446082 482 ntBASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 RN7SL542P-201ENST00000467147 294 ntBASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 VN1R105P-201ENST00000486595 910 ntBASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 RN7SL812P-201ENST00000493791 279 ntBASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 PPM1AP1-201ENST00000502740 1135 ntBASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 SAP18P1-201ENST00000512058 390 ntBASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 RNA5SP497-201ENST00000516081 97 ntBASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 MIR4429-201ENST00000580105 73 ntBASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 AC025175.1-201ENST00000606482 759 ntBASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CCDC141Q6ZP82 AL122126.1-201ENST00000546905 1318 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms