Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC021193.1-201ENST00000511607 420 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 FABP5P12-201ENST00000515543 389 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 IGKV3D-25-201ENST00000519599 235 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 HIGD1AP6-201ENST00000521833 279 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AP001636.2-201ENST00000525517 696 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 RPA2P1-201ENST00000556557 721 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 NMNAT1P5-201ENST00000559657 841 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC009094.1-201ENST00000564443 426 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC138207.8-204ENST00000579588 527 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC005244.1-201ENST00000582566 339 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 DUXAP3-201ENST00000603616 594 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 HIRAP1-201ENST00000605318 787 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 NANOGP3-201ENST00000605855 286 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC108865.2-201ENST00000606881 432 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AC107075.1-201ENST00000613695 314 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 MIR6721-201ENST00000617181 87 ntBASIC5.4□□□□□ -1.54
RNF220Q5VTB9 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF220Q5VTB9 ECM1P2-201ENST00000503354 1577 ntBASIC5.4□□□□□ -1.55
RNF220Q5VTB9 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
RNF220Q5VTB9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF220Q5VTB9 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF220Q5VTB9 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.4□□□□□ -1.55
RNF220Q5VTB9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF220Q5VTB9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF220Q5VTB9 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF220Q5VTB9 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RNF220Q5VTB9 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF220Q5VTB9 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNF220Q5VTB9 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 UBBP2-201ENST00000376781 231 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 RNU1-136P-201ENST00000384181 164 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 RNU6-83P-201ENST00000384568 112 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 GCNT1P4-201ENST00000404096 329 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 OR10T1P-201ENST00000424327 947 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 PNKDP1-201ENST00000435914 430 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 MTATP6P26-201ENST00000445926 662 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 EXTL2P1-201ENST00000446218 416 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 NECAP1P2-201ENST00000455668 727 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC021660.1-201ENST00000465006 554 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC104689.1-201ENST00000473356 768 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 MYL12BP2-201ENST00000503948 512 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC048346.1-201ENST00000510247 144 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 SCARNA18.1-201ENST00000516330 83 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 C1GALT1P3-201ENST00000522049 819 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 ZNF321P-202ENST00000550843 495 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 NBEAP1-201ENST00000554452 979 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC090236.2-201ENST00000587933 1101 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 BNIP3P26-201ENST00000600827 554 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC124916.2-201ENST00000604416 224 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AL390816.3-201ENST00000604527 1066 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AP000255.1-201ENST00000610276 676 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC092266.1-201ENST00000610958 165 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC105227.2-201ENST00000615075 605 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AL136228.1-201ENST00000622221 319 ntBASIC5.39□□□□□ -1.55
RNF220Q5VTB9 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms