Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 AC010486.2-201ENST00000505572 483 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.07□□□□□ -1.6
RAE1P78406 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 AC113347.3-201ENST00000509113 148 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AC117522.2-201ENST00000510049 657 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.07□□□□□ -1.6
RAE1P78406 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.07□□□□□ -1.6
RAE1P78406 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.07□□□□□ -1.6
RAE1P78406 YWHABP2-201ENST00000540201 713 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AC135279.1-201ENST00000543493 504 ntBASIC5.07□□□□□ -1.6
RAE1P78406 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.07□□□□□ -1.6
RAE1P78406 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.07□□□□□ -1.6
RAE1P78406 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.07□□□□□ -1.6
RAE1P78406 ZNF92P3-201ENST00000596594 954 ntBASIC5.07□□□□□ -1.6
RAE1P78406 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.07□□□□□ -1.6
RAE1P78406 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.07□□□□□ -1.6
RAE1P78406 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.07□□□□□ -1.6
RAE1P78406 AL353778.1-201ENST00000603149 408 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AC021749.1-201ENST00000604322 607 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AL162431.4-201ENST00000604674 411 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AC011626.1-201ENST00000604710 562 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AL583856.2-201ENST00000606298 543 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AC015982.1-201ENST00000608113 465 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AC139769.3-201ENST00000618383 175 ntBASIC5.07□□□□□ -1.6
RAE1P78406 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.07□□□□□ -1.6
RAE1P78406 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.07□□□□□ -1.6
RAE1P78406 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RAE1P78406 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RAE1P78406 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAE1P78406 AC138393.1-206ENST00000540997 1886 ntBASIC5.07□□□□□ -1.6
RAE1P78406 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.06□□□□□ -1.6
RAE1P78406 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.06□□□□□ -1.6
RAE1P78406 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 OR5H2-201ENST00000355273 945 ntBASIC5.06□□□□□ -1.6
RAE1P78406 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RAE1P78406 RNA5SP319-201ENST00000362768 119 ntBASIC5.06□□□□□ -1.6
RAE1P78406 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 RNU6-413P-201ENST00000384115 107 ntBASIC5.06□□□□□ -1.6
RAE1P78406 SNORA40.2-201ENST00000390847 128 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AL079342.2-201ENST00000403367 482 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AL590084.1-201ENST00000407885 387 ntBASIC5.06□□□□□ -1.6
RAE1P78406 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.06□□□□□ -1.6
RAE1P78406 RN7SKP286-201ENST00000410894 299 ntBASIC5.06□□□□□ -1.6
RAE1P78406 RNU2-22P-201ENST00000411266 212 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AC092745.2-202ENST00000411880 369 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.06□□□□□ -1.6
RAE1P78406 OR4K6P-201ENST00000416478 897 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.06□□□□□ -1.6
RAE1P78406 MTND2P18-201ENST00000419962 1030 ntBASIC5.06□□□□□ -1.6
RAE1P78406 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 AC092473.1-201ENST00000441098 221 ntBASIC5.06□□□□□ -1.6
RAE1P78406 GAPDHP14-201ENST00000450472 937 ntBASIC5.06□□□□□ -1.6
RAE1P78406 PRPF38AP1-201ENST00000451976 933 ntBASIC5.06□□□□□ -1.6
RAE1P78406 NPM1P13-201ENST00000452663 865 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AC104634.1-201ENST00000452720 462 ntBASIC5.06□□□□□ -1.6
RAE1P78406 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.06□□□□□ -1.6
RAE1P78406 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.06□□□□□ -1.6
RAE1P78406 RPL7P48-201ENST00000461513 746 ntBASIC5.06□□□□□ -1.6
RAE1P78406 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.06□□□□□ -1.6
RAE1P78406 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.06□□□□□ -1.6
RAE1P78406 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.06□□□□□ -1.6
RAE1P78406 AC091959.2-201ENST00000477363 321 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AC012123.2-201ENST00000485809 248 ntBASIC5.06□□□□□ -1.6
RAE1P78406 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.06□□□□□ -1.6
RAE1P78406 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.06□□□□□ -1.6
RAE1P78406 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.06□□□□□ -1.6
RAE1P78406 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.06□□□□□ -1.6
RAE1P78406 AC138938.1-201ENST00000515431 782 ntBASIC5.06□□□□□ -1.6
RAE1P78406 RNU5A-4P-201ENST00000516588 111 ntBASIC5.06□□□□□ -1.6
RAE1P78406 RNA5SP373-201ENST00000517271 95 ntBASIC5.06□□□□□ -1.6
RAE1P78406 TMEM97P2-201ENST00000517841 403 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AC022360.1-201ENST00000521058 340 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.06□□□□□ -1.6
RAE1P78406 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.06□□□□□ -1.6
RAE1P78406 AC124293.1-201ENST00000530034 493 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AP002812.4-201ENST00000532139 286 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.06□□□□□ -1.6
RAE1P78406 AC027544.3-201ENST00000535082 757 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.06□□□□□ -1.6
RAE1P78406 NMNAT1P5-201ENST00000559657 841 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AC040958.1-201ENST00000561102 201 ntBASIC5.06□□□□□ -1.6
RAE1P78406 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.06□□□□□ -1.6
RAE1P78406 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAE1P78406 AP001542.2-201ENST00000593141 364 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.06□□□□□ -1.6
RAE1P78406 AL139407.1-201ENST00000613826 1175 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AC091932.2-201ENST00000623014 291 ntBASIC5.06□□□□□ -1.6
RAE1P78406 MIR1322-201ENST00000638013 71 ntBASIC5.06□□□□□ -1.6
RAE1P78406 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.06□□□□□ -1.6
RAE1P78406 RLIMP2-201ENST00000427891 1563 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms