Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TMBIM7P-201ENST00000418074 855 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 AL356387.2-201ENST00000422272 243 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 AL136231.1-201ENST00000429407 730 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNA1P78396 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNA1P78396 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 AC090142.1-201ENST00000465776 462 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.37□□□□□ -1.55
CCNA1P78396 AC073073.1-201ENST00000493920 463 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 AC025164.1-201ENST00000496249 478 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 NIFKP7-201ENST00000503365 834 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 KATNBL1P4-201ENST00000503545 918 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.37□□□□□ -1.55
CCNA1P78396 RFPL4AP5-201ENST00000514977 504 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 NPM1P52-201ENST00000518264 846 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 NPM1P6-201ENST00000521088 871 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNA1P78396 AC105129.1-201ENST00000560250 297 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNA1P78396 MIR3160-1-201ENST00000577972 85 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.37□□□□□ -1.55
CCNA1P78396 AC012409.3-201ENST00000611343 981 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.37□□□□□ -1.55
CCNA1P78396 AC006453.5-201ENST00000636451 619 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 AL136164.3-201ENST00000624429 3978 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 AC009643.2-201ENST00000603543 1448 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCNA1P78396 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CCNA1P78396 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CCNA1P78396 CCT8P1-201ENST00000413611 1657 ntBASIC5.37□□□□□ -1.55
CCNA1P78396 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.37□□□□□ -1.55
CCNA1P78396 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.37□□□□□ -1.55
CCNA1P78396 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.36□□□□□ -1.55
CCNA1P78396 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNA1P78396 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNA1P78396 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.36□□□□□ -1.55
CCNA1P78396 RNU4-44P-201ENST00000363050 141 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 Y_RNA.126-201ENST00000363382 111 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CCNA1P78396 AL590762.2-201ENST00000395798 571 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 SDHCP2-201ENST00000398565 501 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 RPL21P67-201ENST00000402896 478 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNA1P78396 COX5BP7-201ENST00000414780 274 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCNA1P78396 MTCO1P51-201ENST00000427672 1060 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNA1P78396 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNA1P78396 YWHAZP2-201ENST00000440317 728 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 CYCSP24-201ENST00000445119 316 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 MRPL35P2-201ENST00000448009 511 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNA1P78396 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNA1P78396 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.36□□□□□ -1.55
CCNA1P78396 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.36□□□□□ -1.55
CCNA1P78396 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNA1P78396 AGGF1P9-201ENST00000561884 913 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 SULT1C2P2-201ENST00000562517 294 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 AC010503.3-201ENST00000594355 540 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 AC023043.4-201ENST00000612081 449 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNA1P78396 AP002967.1-201ENST00000624203 539 ntBASIC5.36□□□□□ -1.55
CCNA1P78396 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNA1P78396 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.36□□□□□ -1.55
CCNA1P78396 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNA1P78396 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.36□□□□□ -1.55
CCNA1P78396 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.36□□□□□ -1.55
CCNA1P78396 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCNA1P78396 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCNA1P78396 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCNA1P78396 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCNA1P78396 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNA1P78396 AC107027.3-201ENST00000565095 3473 ntBASIC5.35□□□□□ -1.55
CCNA1P78396 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CCNA1P78396 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.35□□□□□ -1.55
CCNA1P78396 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
CCNA1P78396 UGT2B26P-201ENST00000508672 1613 ntBASIC5.35□□□□□ -1.55
CCNA1P78396 TCP11X1-202ENST00000622971 1372 ntBASIC5.35□□□□□ -1.55
CCNA1P78396 OR1F12-201ENST00000402365 945 ntBASIC5.35□□□□□ -1.55
CCNA1P78396 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCNA1P78396 AC013470.3-201ENST00000420252 1194 ntBASIC5.35□□□□□ -1.55
CCNA1P78396 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNA1P78396 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.35□□□□□ -1.55
CCNA1P78396 CBX1P1-201ENST00000440184 427 ntBASIC5.35□□□□□ -1.55
CCNA1P78396 AC108463.1-201ENST00000450258 347 ntBASIC5.35□□□□□ -1.55
CCNA1P78396 RN7SL303P-201ENST00000469773 251 ntBASIC5.35□□□□□ -1.55
CCNA1P78396 RN7SL41P-201ENST00000476144 297 ntBASIC5.35□□□□□ -1.55
CCNA1P78396 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms