Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 CLIC4P1-201ENST00000453177 535 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 AL645937.3-201ENST00000453647 936 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 MTATP6P14-201ENST00000455189 673 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.34□□□□□ -1.55
HDAC4P56524 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.34□□□□□ -1.55
HDAC4P56524 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 BX284632.1-201ENST00000478218 541 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 MYL12BP2-201ENST00000503948 512 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 NAMPTP2-201ENST00000505629 1115 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 HIGD1AP14-201ENST00000507617 282 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HDAC4P56524 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.34□□□□□ -1.55
HDAC4P56524 C1DP5-201ENST00000525775 383 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.34□□□□□ -1.55
HDAC4P56524 AC025918.2-201ENST00000558683 763 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.34□□□□□ -1.55
HDAC4P56524 MIR4760-201ENST00000585040 80 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 AL137072.1-201ENST00000603444 466 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 AC073137.1-201ENST00000605636 634 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.34□□□□□ -1.55
HDAC4P56524 AP001033.2-201ENST00000609701 1003 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 MIR6748-201ENST00000610433 71 ntBASIC5.34□□□□□ -1.55
HDAC4P56524 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
HDAC4P56524 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.34□□□□□ -1.55
HDAC4P56524 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HDAC4P56524 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HDAC4P56524 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HDAC4P56524 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HDAC4P56524 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HDAC4P56524 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HDAC4P56524 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.33□□□□□ -1.56
HDAC4P56524 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HDAC4P56524 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 CASC19-284ENST00000642142 1868 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.33□□□□□ -1.56
HDAC4P56524 AL035079.1-201ENST00000405210 287 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 RNU4-27P-201ENST00000410889 139 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AL606495.1-201ENST00000422100 813 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.33□□□□□ -1.56
HDAC4P56524 AL139148.1-201ENST00000427122 680 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.33□□□□□ -1.56
HDAC4P56524 BX323845.1-201ENST00000432417 179 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.33□□□□□ -1.56
HDAC4P56524 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.33□□□□□ -1.56
HDAC4P56524 MTCYBP12-201ENST00000440559 1134 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 TVP23BP2-201ENST00000455082 615 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AC021660.1-201ENST00000465006 554 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 SYT14P1-201ENST00000481459 721 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.33□□□□□ -1.56
HDAC4P56524 SNRPCP2-201ENST00000504370 475 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.33□□□□□ -1.56
HDAC4P56524 CDH12P4-201ENST00000517835 295 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 CDH12P3-201ENST00000517935 295 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 CDH12P1-201ENST00000518435 295 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.33□□□□□ -1.56
HDAC4P56524 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.33□□□□□ -1.56
HDAC4P56524 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 NPM1P35-201ENST00000533043 868 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AC004825.1-201ENST00000555068 586 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.33□□□□□ -1.56
HDAC4P56524 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.33□□□□□ -1.56
HDAC4P56524 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 AC124856.1-201ENST00000600819 896 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AF230666.2-201ENST00000602328 725 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AL008729.2-201ENST00000606393 473 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AL445528.2-201ENST00000620582 470 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AC099494.2-201ENST00000623371 978 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 AC090772.4-201ENST00000623599 362 ntBASIC5.33□□□□□ -1.56
HDAC4P56524 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.33□□□□□ -1.56
HDAC4P56524 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HDAC4P56524 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HDAC4P56524 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.33□□□□□ -1.56
HDAC4P56524 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms