Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC093510.2-201ENST00000562820 896 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCN3P51790 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCN3P51790 DNAJC19P3-201ENST00000594491 331 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AC068790.4-201ENST00000602474 263 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AL121932.1-201ENST00000605542 214 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AL163051.2-201ENST00000618976 735 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CLCN3P51790 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCN3P51790 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CLCN3P51790 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCN3P51790 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCN3P51790 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLCN3P51790 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCN3P51790 AC009643.2-201ENST00000603543 1448 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCN3P51790 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCN3P51790 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCN3P51790 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCN3P51790 RNU6-650P-201ENST00000365658 111 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLCN3P51790 MIR141-201ENST00000384975 95 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 MIR137-201ENST00000385223 102 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 GLULP6-201ENST00000399502 913 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCN3P51790 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCN3P51790 ARL2BPP3-201ENST00000421226 480 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCN3P51790 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCN3P51790 GXYLT1P1-201ENST00000446657 490 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCN3P51790 AC010326.1-201ENST00000462726 602 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 RPL5P13-201ENST00000462840 709 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AL049874.2-201ENST00000492636 288 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AC104971.1-201ENST00000495117 578 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AC093890.1-201ENST00000502554 540 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AC016550.1-201ENST00000505348 785 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AC092593.2-201ENST00000513866 913 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 BUD31P1-201ENST00000521828 359 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AC138832.1-201ENST00000522871 556 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AC113192.3-201ENST00000529152 742 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCN3P51790 AC093014.1-201ENST00000548926 724 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AC087888.1-201ENST00000550884 1254 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCN3P51790 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCN3P51790 RN7SL802P-201ENST00000577858 299 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AC209154.1-201ENST00000582156 337 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCN3P51790 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCN3P51790 AC090617.9-201ENST00000623751 147 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 FRG1EP-201ENST00000634469 770 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CLCN3P51790 AC002525.1-201ENST00000624392 1622 ntBASIC5.32□□□□□ -1.56
CLCN3P51790 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CLCN3P51790 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCN3P51790 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCN3P51790 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCN3P51790 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CLCN3P51790 Z98755.1-201ENST00000407015 1384 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCN3P51790 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCN3P51790 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCN3P51790 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CLCN3P51790 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCN3P51790 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCN3P51790 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CLCN3P51790 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCN3P51790 RNA5SP332-201ENST00000391063 115 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCN3P51790 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCN3P51790 AC016397.1-201ENST00000412463 242 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 LINC00993-201ENST00000420453 540 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 NIPA2P1-201ENST00000426223 976 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCN3P51790 AL359265.2-201ENST00000434367 631 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 RPS17P8-201ENST00000434525 335 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCN3P51790 CEACAMP6-201ENST00000452007 574 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 EIF2S2P5-201ENST00000457635 968 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCN3P51790 AC245028.2-201ENST00000458673 253 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 RN7SL860P-201ENST00000473738 223 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 RN7SL558P-201ENST00000497468 299 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 AC073358.1-201ENST00000505671 684 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 AC108120.2-201ENST00000512973 294 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCN3P51790 OSBPL9P3-201ENST00000534523 595 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 AC093249.4-201ENST00000564755 259 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 MIR5699-201ENST00000578903 90 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 SNORA74C-1-201ENST00000580726 201 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCN3P51790 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCN3P51790 AC010503.3-201ENST00000594355 540 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 AC005776.1-201ENST00000603164 290 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 LSM1P2-201ENST00000604911 322 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 AL355816.2-201ENST00000610049 647 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 MIR6798-201ENST00000612887 67 ntBASIC5.31□□□□□ -1.56
CLCN3P51790 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms