Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX2P48431 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.83□□□□□ -1.64
SOX2P48431 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SOX2P48431 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX2P48431 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 AC083899.1-201ENST00000454465 3819 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 TTC39DP-201ENST00000416781 1688 ntBASIC4.83□□□□□ -1.64
SOX2P48431 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
SOX2P48431 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SOX2P48431 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SOX2P48431 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SOX2P48431 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX2P48431 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SOX2P48431 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX2P48431 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX2P48431 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SOX2P48431 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.82□□□□□ -1.64
SOX2P48431 AC100757.1-201ENST00000616872 1835 ntBASIC4.82□□□□□ -1.64
SOX2P48431 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX2P48431 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX2P48431 RNA5SP232-201ENST00000364144 119 ntBASIC4.82□□□□□ -1.64
SOX2P48431 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.82□□□□□ -1.64
SOX2P48431 EI24P3-201ENST00000399046 1062 ntBASIC4.82□□□□□ -1.64
SOX2P48431 HMGB3P7-201ENST00000400214 611 ntBASIC4.82□□□□□ -1.64
SOX2P48431 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.82□□□□□ -1.64
SOX2P48431 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX2P48431 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX2P48431 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX2P48431 PTP4A1P5-201ENST00000420305 455 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX2P48431 MTND4P20-201ENST00000424125 869 ntBASIC4.82□□□□□ -1.64
SOX2P48431 NANOGP4-201ENST00000427230 913 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AP001324.1-201ENST00000428553 399 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC022022.1-201ENST00000430304 178 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.82□□□□□ -1.64
SOX2P48431 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SOX2P48431 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX2P48431 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX2P48431 VN1R110P-201ENST00000438988 971 ntBASIC4.82□□□□□ -1.64
SOX2P48431 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.82□□□□□ -1.64
SOX2P48431 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.82□□□□□ -1.64
SOX2P48431 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.82□□□□□ -1.64
SOX2P48431 AL606490.1-201ENST00000452266 765 ntBASIC4.82□□□□□ -1.64
SOX2P48431 MRPL42P4-201ENST00000453267 443 ntBASIC4.82□□□□□ -1.64
SOX2P48431 PPIAP27-201ENST00000453800 265 ntBASIC4.82□□□□□ -1.64
SOX2P48431 CEACAMP11-201ENST00000455211 583 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC026348.1-201ENST00000462549 1053 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC096741.1-201ENST00000472250 846 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC011979.1-201ENST00000472300 483 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC021006.1-201ENST00000489849 553 ntBASIC4.82□□□□□ -1.64
SOX2P48431 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SOX2P48431 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX2P48431 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX2P48431 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX2P48431 HMGN1P9-201ENST00000515212 298 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX2P48431 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX2P48431 AC010306.1-201ENST00000523223 1117 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC090819.1-201ENST00000523800 1111 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.82□□□□□ -1.64
SOX2P48431 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.82□□□□□ -1.64
SOX2P48431 AP003033.2-201ENST00000528901 805 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX2P48431 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SOX2P48431 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SOX2P48431 AL358913.1-201ENST00000554342 121 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX2P48431 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.82□□□□□ -1.64
SOX2P48431 NMNAT1P5-201ENST00000559657 841 ntBASIC4.82□□□□□ -1.64
SOX2P48431 NIFKP8-201ENST00000560500 874 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX2P48431 MIR3912-201ENST00000577566 105 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC022884.3-201ENST00000579571 248 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX2P48431 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.82□□□□□ -1.64
SOX2P48431 AC005479.3-201ENST00000602790 431 ntBASIC4.82□□□□□ -1.64
SOX2P48431 AC009237.13-201ENST00000603193 276 ntBASIC4.82□□□□□ -1.64
SOX2P48431 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.82□□□□□ -1.64
SOX2P48431 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.82□□□□□ -1.64
SOX2P48431 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SOX2P48431 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SOX2P48431 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SOX2P48431 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
SOX2P48431 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX2P48431 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SOX2P48431 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SOX2P48431 VPS35P1-201ENST00000563400 1518 ntBASIC4.82□□□□□ -1.64
SOX2P48431 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
SOX2P48431 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SOX2P48431 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX2P48431 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SOX2P48431 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.81□□□□□ -1.64
SOX2P48431 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX2P48431 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
SOX2P48431 Z98755.1-201ENST00000407015 1384 ntBASIC4.81□□□□□ -1.64
SOX2P48431 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms