Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC245047.2-201ENST00000441060 530 ntBASIC5.18□□□□□ -1.58
CTNNA1P35221 OR7E125P-201ENST00000443450 846 ntBASIC5.18□□□□□ -1.58
CTNNA1P35221 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.18□□□□□ -1.58
CTNNA1P35221 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.18□□□□□ -1.58
CTNNA1P35221 AC092647.2-201ENST00000452998 253 ntBASIC5.18□□□□□ -1.58
CTNNA1P35221 AP000942.1-201ENST00000463969 747 ntBASIC5.18□□□□□ -1.58
CTNNA1P35221 AC097484.1-201ENST00000471148 389 ntBASIC5.18□□□□□ -1.58
CTNNA1P35221 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.18□□□□□ -1.58
CTNNA1P35221 SNORD116-26-201ENST00000516006 96 ntBASIC5.18□□□□□ -1.58
CTNNA1P35221 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.18□□□□□ -1.58
CTNNA1P35221 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.18□□□□□ -1.58
CTNNA1P35221 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.18□□□□□ -1.58
CTNNA1P35221 AL109741.3-201ENST00000561748 592 ntBASIC5.18□□□□□ -1.58
CTNNA1P35221 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CTNNA1P35221 AC099494.2-201ENST00000623371 978 ntBASIC5.18□□□□□ -1.58
CTNNA1P35221 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.18□□□□□ -1.58
CTNNA1P35221 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.18□□□□□ -1.58
CTNNA1P35221 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTNNA1P35221 DDX18P5-201ENST00000534547 1306 ntBASIC5.18□□□□□ -1.58
CTNNA1P35221 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTNNA1P35221 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CTNNA1P35221 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
CTNNA1P35221 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.17□□□□□ -1.58
CTNNA1P35221 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA1P35221 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
CTNNA1P35221 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA1P35221 AL049555.1-201ENST00000562834 1933 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.17□□□□□ -1.58
CTNNA1P35221 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA1P35221 RN7SKP160-201ENST00000363804 340 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 RNU6-883P-201ENST00000384597 107 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 AL592291.1-201ENST00000403830 352 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 RN7SKP199-201ENST00000410325 305 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 Z68694.1-201ENST00000413929 841 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 NPM1P4-201ENST00000414095 812 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 LINC01881-201ENST00000416103 412 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CTNNA1P35221 NMNAT1P2-201ENST00000435192 860 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.17□□□□□ -1.58
CTNNA1P35221 MED6P1-201ENST00000439659 713 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.17□□□□□ -1.58
CTNNA1P35221 EEF1A1P1-201ENST00000447052 739 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 OR52A4P-201ENST00000472867 958 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.17□□□□□ -1.58
CTNNA1P35221 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.17□□□□□ -1.58
CTNNA1P35221 RN7SKP260-201ENST00000516907 149 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CTNNA1P35221 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.17□□□□□ -1.58
CTNNA1P35221 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CTNNA1P35221 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.17□□□□□ -1.58
CTNNA1P35221 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.17□□□□□ -1.58
CTNNA1P35221 CBX3P2-202ENST00000583365 535 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.17□□□□□ -1.58
CTNNA1P35221 EIF1P5-201ENST00000585002 234 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.17□□□□□ -1.58
CTNNA1P35221 AC005242.1-201ENST00000585658 438 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 VN1R84P-201ENST00000593697 235 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.17□□□□□ -1.58
CTNNA1P35221 AC005377.1-201ENST00000605126 456 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 AL096803.3-201ENST00000609032 532 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 AC126915.2-201ENST00000610957 190 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA1P35221 AC104307.1-201ENST00000616142 196 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 AC026124.2-201ENST00000621847 656 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 BMS1P21-201ENST00000634565 365 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CTNNA1P35221 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA1P35221 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.17□□□□□ -1.58
CTNNA1P35221 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA1P35221 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA1P35221 MAPK10-349ENST00000641767 3661 ntBASIC5.17□□□□□ -1.58
CTNNA1P35221 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA1P35221 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.17□□□□□ -1.58
CTNNA1P35221 AC083843.3-201ENST00000623679 2186 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CTNNA1P35221 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CTNNA1P35221 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNA1P35221 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNA1P35221 RN7SKP162-201ENST00000363605 345 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNA1P35221 SNORA66-201ENST00000384792 133 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 RGS17P1-201ENST00000423358 553 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 CR848007.2-201ENST00000424918 787 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 NPM1P33-201ENST00000438918 872 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 RPL34P20-201ENST00000442771 351 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNA1P35221 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNA1P35221 TPMTP4-201ENST00000450749 678 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 HMGB3P21-201ENST00000452483 547 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 SETP20-201ENST00000457046 852 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CTNNA1P35221 UBA52P7-201ENST00000486088 380 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNA1P35221 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNA1P35221 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNA1P35221 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.16□□□□□ -1.58
CTNNA1P35221 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNA1P35221 RNA5SP43-201ENST00000516559 110 ntBASIC5.16□□□□□ -1.58
CTNNA1P35221 Y_RNA.719-201ENST00000517156 106 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms