Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXA9P31269 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HOXA9P31269 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA9P31269 OR52H1-202ENST00000641796 1061 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA9P31269 CCT8P1-201ENST00000413611 1657 ntBASIC4.88□□□□□ -1.63
HOXA9P31269 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXA9P31269 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HOXA9P31269 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HOXA9P31269 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA9P31269 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXA9P31269 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA9P31269 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA9P31269 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXA9P31269 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXA9P31269 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 SALL4P2-201ENST00000423288 2910 ntBASIC4.87□□□□□ -1.63
HOXA9P31269 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXA9P31269 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXA9P31269 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXA9P31269 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXA9P31269 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA9P31269 AC021146.4-201ENST00000309229 279 ntBASIC4.87□□□□□ -1.63
HOXA9P31269 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HOXA9P31269 TMBIM7P-201ENST00000418074 855 ntBASIC4.87□□□□□ -1.63
HOXA9P31269 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA9P31269 AC007064.3-201ENST00000422608 359 ntBASIC4.87□□□□□ -1.63
HOXA9P31269 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXA9P31269 GTF3AP5-201ENST00000442645 697 ntBASIC4.87□□□□□ -1.63
HOXA9P31269 AP000942.1-201ENST00000463969 747 ntBASIC4.87□□□□□ -1.63
HOXA9P31269 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXA9P31269 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
HOXA9P31269 KCTD9P6-201ENST00000522306 950 ntBASIC4.87□□□□□ -1.63
HOXA9P31269 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXA9P31269 AC010547.7-201ENST00000570323 333 ntBASIC4.87□□□□□ -1.63
HOXA9P31269 AC103792.1-201ENST00000603591 919 ntBASIC4.87□□□□□ -1.63
HOXA9P31269 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXA9P31269 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 AC021242.1-201ENST00000507315 2035 ntBASIC4.87□□□□□ -1.63
HOXA9P31269 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA9P31269 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA9P31269 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HOXA9P31269 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA9P31269 MFSD8-242ENST00000641690 4199 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HOXA9P31269 OR6C69P-201ENST00000394268 893 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 AP000580.1-201ENST00000404439 358 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 U3.35-201ENST00000408405 208 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA9P31269 AC013470.3-201ENST00000420252 1194 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 AC106901.1-201ENST00000425086 698 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA9P31269 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA9P31269 CBX1P1-201ENST00000440184 427 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA9P31269 AL356981.1-201ENST00000454879 684 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 AC107015.1-201ENST00000466902 747 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 RN7SL810P-201ENST00000493031 276 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA9P31269 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA9P31269 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA9P31269 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXA9P31269 ADAM3B-201ENST00000569937 840 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 MIR3160-1-201ENST00000577972 85 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA9P31269 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXA9P31269 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 AP003499.2-201ENST00000624100 483 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXA9P31269 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXA9P31269 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA9P31269 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA9P31269 RLIMP2-201ENST00000427891 1563 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXA9P31269 UGT2B26P-201ENST00000508672 1613 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXA9P31269 AL031119.1-201ENST00000404707 1879 ntBASIC4.86□□□□□ -1.63
HOXA9P31269 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXA9P31269 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA9P31269 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA9P31269 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA9P31269 AC006971.1-201ENST00000407916 4486 ntBASIC4.85□□□□□ -1.63
HOXA9P31269 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXA9P31269 AC017079.1-201ENST00000333650 415 ntBASIC4.85□□□□□ -1.63
HOXA9P31269 UBBP2-201ENST00000376781 231 ntBASIC4.85□□□□□ -1.63
HOXA9P31269 RNU6-1320P-201ENST00000390838 107 ntBASIC4.85□□□□□ -1.63
HOXA9P31269 RNU6-1269P-201ENST00000391139 107 ntBASIC4.85□□□□□ -1.63
HOXA9P31269 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA9P31269 RN7SKP247-201ENST00000411094 308 ntBASIC4.85□□□□□ -1.63
HOXA9P31269 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA9P31269 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms