Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AC010326.1-201ENST00000462726 602 ntBASIC4.54□□□□□ -1.68
MMP11P24347 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.54□□□□□ -1.68
MMP11P24347 MTND3P6-201ENST00000485242 339 ntBASIC4.54□□□□□ -1.68
MMP11P24347 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
MMP11P24347 OR52A4P-203ENST00000498233 1014 ntBASIC4.54□□□□□ -1.68
MMP11P24347 HAUS1P1-201ENST00000505275 832 ntBASIC4.54□□□□□ -1.68
MMP11P24347 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.54□□□□□ -1.68
MMP11P24347 OR51K1P-201ENST00000510214 950 ntBASIC4.54□□□□□ -1.68
MMP11P24347 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.54□□□□□ -1.68
MMP11P24347 snoU109.6-201ENST00000516831 118 ntBASIC4.54□□□□□ -1.68
MMP11P24347 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.54□□□□□ -1.68
MMP11P24347 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.54□□□□□ -1.68
MMP11P24347 OR7E10P-201ENST00000526420 991 ntBASIC4.54□□□□□ -1.68
MMP11P24347 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.54□□□□□ -1.68
MMP11P24347 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.54□□□□□ -1.68
MMP11P24347 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
MMP11P24347 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.54□□□□□ -1.68
MMP11P24347 AC068790.7-201ENST00000602347 528 ntBASIC4.54□□□□□ -1.68
MMP11P24347 FAM27B-201ENST00000610601 213 ntBASIC4.54□□□□□ -1.68
MMP11P24347 MIR6853-201ENST00000619642 74 ntBASIC4.54□□□□□ -1.68
MMP11P24347 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.54□□□□□ -1.68
MMP11P24347 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
MMP11P24347 MFSD8-216ENST00000641147 4009 ntBASIC4.54□□□□□ -1.68
MMP11P24347 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
MMP11P24347 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.54□□□□□ -1.68
MMP11P24347 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
MMP11P24347 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MMP11P24347 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MMP11P24347 AC009643.2-201ENST00000603543 1448 ntBASIC4.54□□□□□ -1.68
MMP11P24347 CASC19-206ENST00000641028 1430 ntBASIC4.54□□□□□ -1.68
MMP11P24347 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.54□□□□□ -1.68
MMP11P24347 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.54□□□□□ -1.68
MMP11P24347 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MMP11P24347 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
MMP11P24347 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP11P24347 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
MMP11P24347 AC008549.2-201ENST00000333482 706 ntBASIC4.53□□□□□ -1.68
MMP11P24347 RNA5SP505-201ENST00000364748 108 ntBASIC4.53□□□□□ -1.68
MMP11P24347 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 SNORA68.2-201ENST00000391263 128 ntBASIC4.53□□□□□ -1.68
MMP11P24347 U3.30-201ENST00000391308 210 ntBASIC4.53□□□□□ -1.68
MMP11P24347 AL034403.1-201ENST00000399414 885 ntBASIC4.53□□□□□ -1.68
MMP11P24347 RN7SKP97-201ENST00000410966 333 ntBASIC4.53□□□□□ -1.68
MMP11P24347 AL691447.1-201ENST00000419456 387 ntBASIC4.53□□□□□ -1.68
MMP11P24347 EIF4A1P1-201ENST00000420241 934 ntBASIC4.53□□□□□ -1.68
MMP11P24347 EIF4HP2-201ENST00000424380 563 ntBASIC4.53□□□□□ -1.68
MMP11P24347 RPL23AP4-201ENST00000427757 463 ntBASIC4.53□□□□□ -1.68
MMP11P24347 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.53□□□□□ -1.68
MMP11P24347 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.53□□□□□ -1.68
MMP11P24347 AL157884.3-201ENST00000448273 1184 ntBASIC4.53□□□□□ -1.68
MMP11P24347 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP11P24347 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 NDUFA12P1-201ENST00000455914 406 ntBASIC4.53□□□□□ -1.68
MMP11P24347 RN7SL517P-201ENST00000462240 305 ntBASIC4.53□□□□□ -1.68
MMP11P24347 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP11P24347 AC112206.1-201ENST00000468416 477 ntBASIC4.53□□□□□ -1.68
MMP11P24347 AC104629.2-201ENST00000468627 598 ntBASIC4.53□□□□□ -1.68
MMP11P24347 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP11P24347 RPL23AP72-201ENST00000492447 435 ntBASIC4.53□□□□□ -1.68
MMP11P24347 SCARNA22-201ENST00000503991 125 ntBASIC4.53□□□□□ -1.68
MMP11P24347 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP11P24347 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 RN7SKP46-201ENST00000515942 234 ntBASIC4.53□□□□□ -1.68
MMP11P24347 AC107918.3-201ENST00000533272 382 ntBASIC4.53□□□□□ -1.68
MMP11P24347 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.53□□□□□ -1.68
MMP11P24347 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP11P24347 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP11P24347 AC022726.1-201ENST00000587475 207 ntBASIC4.53□□□□□ -1.68
MMP11P24347 AC098935.2-201ENST00000604222 466 ntBASIC4.53□□□□□ -1.68
MMP11P24347 AL121932.1-201ENST00000605542 214 ntBASIC4.53□□□□□ -1.68
MMP11P24347 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.53□□□□□ -1.68
MMP11P24347 MIR7703-201ENST00000620784 77 ntBASIC4.53□□□□□ -1.68
MMP11P24347 MIR7641-1-201ENST00000627518 61 ntBASIC4.53□□□□□ -1.68
MMP11P24347 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP11P24347 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
MMP11P24347 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP11P24347 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MMP11P24347 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
MMP11P24347 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
MMP11P24347 DDX18P5-201ENST00000534547 1306 ntBASIC4.52□□□□□ -1.69
MMP11P24347 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MMP11P24347 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.52□□□□□ -1.69
MMP11P24347 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
MMP11P24347 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.52□□□□□ -1.69
MMP11P24347 BMS1P3-201ENST00000372011 932 ntBASIC4.52□□□□□ -1.69
MMP11P24347 ST13P16-201ENST00000401760 781 ntBASIC4.52□□□□□ -1.69
MMP11P24347 RPS3AP23-201ENST00000401762 784 ntBASIC4.52□□□□□ -1.69
MMP11P24347 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms