Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 GAPDHP23-201ENST00000444823 993 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 VN1R38P-201ENST00000450265 887 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AP006222.1-205ENST00000450734 457 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC3P19447 MTCO2P18-201ENST00000457151 658 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 RPS4XP12-201ENST00000461747 709 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC3P19447 SNRPCP3-201ENST00000474888 476 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AC079841.1-201ENST00000481228 950 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC3P19447 AC008494.2-201ENST00000514544 370 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 RNY4P37-201ENST00000516225 96 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 SCARNA6.1-201ENST00000516989 238 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 TBCA-206ENST00000518338 551 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC3P19447 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC3P19447 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC3P19447 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC3P19447 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC3P19447 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC3P19447 AC011260.1-201ENST00000578420 472 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AC022146.1-201ENST00000595307 847 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AL355816.1-201ENST00000607951 118 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AL354760.1-201ENST00000608357 643 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AL391497.1-201ENST00000608671 547 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AL133243.1-201ENST00000614487 366 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 CR392039.4-201ENST00000624968 501 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 PCMTD1P7-201ENST00000634506 357 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AC003992.1-201ENST00000635364 557 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 OR2L1P-202ENST00000641567 1023 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AC010168.2-201ENST00000562691 5428 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AC073429.2-201ENST00000569694 1444 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC3P19447 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
ERCC3P19447 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC3P19447 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC3P19447 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
ERCC3P19447 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.06□□□□□ -1.28
ERCC3P19447 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC3P19447 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC3P19447 RNA5SP242-201ENST00000364171 118 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 RNU6-1151P-201ENST00000384684 107 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 MIR92A2-201ENST00000385299 75 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 ATP5F1P4-201ENST00000397288 746 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.06□□□□□ -1.28
ERCC3P19447 AL589647.1-201ENST00000402485 466 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 MIR1284-201ENST00000408337 120 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC7.06□□□□□ -1.28
ERCC3P19447 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC3P19447 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC3P19447 TMX2P1-201ENST00000436507 708 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 RAB11AP1-201ENST00000442978 646 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 TRIM60P16-201ENST00000444048 694 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 AC023271.1-201ENST00000445936 1090 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 HMGN1P36-201ENST00000446623 298 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC3P19447 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
ERCC3P19447 RPL36AP33-201ENST00000450395 310 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC3P19447 ZNF114P1-201ENST00000453500 292 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 AL024509.2-201ENST00000493462 493 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 RNU6-202P-201ENST00000515998 96 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 RNU6-347P-201ENST00000516658 105 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC3P19447 AC106038.2-201ENST00000520706 568 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC3P19447 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.06□□□□□ -1.28
ERCC3P19447 MTCYBP20-201ENST00000524239 1129 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
ERCC3P19447 HIGD1AP10-201ENST00000527837 282 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC3P19447 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC7.06□□□□□ -1.28
ERCC3P19447 AC006362.1-201ENST00000567392 174 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC3P19447 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC3P19447 AC008555.7-201ENST00000605008 583 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 AC024255.1-201ENST00000614376 102 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.06□□□□□ -1.28
ERCC3P19447 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC7.06□□□□□ -1.28
ERCC3P19447 AP005431.1-201ENST00000618479 319 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 AC015804.1-201ENST00000622935 435 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 AC084035.1-201ENST00000634543 607 ntBASIC7.06□□□□□ -1.28
ERCC3P19447 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC3P19447 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC3P19447 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
ERCC3P19447 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.06□□□□□ -1.28
ERCC3P19447 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
ERCC3P19447 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC3P19447 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.06□□□□□ -1.28
ERCC3P19447 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC3P19447 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC3P19447 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC3P19447 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC3P19447 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ERCC3P19447 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.06□□□□□ -1.28
ERCC3P19447 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC009313.2-201ENST00000417893 1941 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC3P19447 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC3P19447 OR5BR1P-201ENST00000524992 1330 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms